The 2.0 version of rSNPBase

Variant report

Variant rs12052639
Chromosome Location chr2:99086016-99086017
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:99072200-99086200 Weak transcription Fetal Intestine Small intestine
2 chr2:99072400-99095000 Weak transcription Fetal Intestine Large intestine
3 chr2:99072600-99119600 Weak transcription Aorta Aorta
4 chr2:99075600-99091800 Enhancers Primary monocytes fromperipheralblood blood
5 chr2:99076400-99095400 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr2:99078400-99095600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr2:99080200-99094200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr2:99080400-99091400 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr2:99081400-99095800 Weak transcription HUES64 Cell Line embryonic stem cell
10 chr2:99081800-99091400 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr2:99082000-99086800 Weak transcription Liver Liver
12 chr2:99082200-99089800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr2:99082200-99091400 Weak transcription H9 Cell Line embryonic stem cell
14 chr2:99082400-99086400 Enhancers Primary T regulatory cells fromperipheralblood blood
15 chr2:99082400-99088600 Weak transcription Psoas Muscle Psoas
16 chr2:99082400-99090200 Enhancers Primary Natural Killer cells fromperipheralblood blood
17 chr2:99082600-99088200 Weak transcription Brain Substantia Nigra brain
18 chr2:99082600-99088400 Weak transcription Brain Cingulate Gyrus brain
19 chr2:99082600-99088400 Weak transcription Brain Hippocampus Middle brain
20 chr2:99082600-99088400 Weak transcription Fetal Lung lung
21 chr2:99082600-99088600 Weak transcription Gastric stomach
22 chr2:99082600-99096200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr2:99083000-99086600 Weak transcription Adipose Nuclei Adipose
24 chr2:99083000-99087600 Weak transcription Pancreas Pancrea
25 chr2:99083000-99088400 Weak transcription Rectal Smooth Muscle rectum
26 chr2:99083000-99088400 Weak transcription Stomach Smooth Muscle stomach
27 chr2:99083000-99089600 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr2:99083000-99091000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr2:99083200-99086200 Weak transcription Fetal Stomach stomach
30 chr2:99083200-99086400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr2:99083200-99086400 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr2:99083200-99090000 Enhancers Primary T cells fromperipheralblood blood
33 chr2:99083200-99091400 Weak transcription H1 Cell Line embryonic stem cell
34 chr2:99083200-99091400 Weak transcription HMEC breast
35 chr2:99083200-99091800 Weak transcription NHEK skin
36 chr2:99083200-99093000 Weak transcription Fetal Heart heart
37 chr2:99083200-99094200 Weak transcription Placenta Placenta
38 chr2:99083400-99086400 Enhancers Primary T helper cells fromperipheralblood blood
39 chr2:99083400-99087600 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr2:99083400-99088400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr2:99083400-99088600 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr2:99083600-99086400 Weak transcription Right Ventricle heart
43 chr2:99083600-99088200 Weak transcription Right Atrium heart
44 chr2:99083600-99088200 Weak transcription Stomach Mucosa stomach
45 chr2:99083600-99088400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr2:99083600-99090000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
47 chr2:99083600-99090800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr2:99083800-99086200 Weak transcription Fetal Muscle Trunk muscle
49 chr2:99083800-99086600 Weak transcription Colonic Mucosa Colon
50 chr2:99083800-99090000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015