The 2.0 version of rSNPBase

Variant report

Variant rs72821924
Chromosome Location chr2:99114924-99114925
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:99072600-99119600 Weak transcription Aorta Aorta
2 chr2:99098400-99115200 Weak transcription Fetal Adrenal Gland Adrenal Gland
3 chr2:99100400-99121600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr2:99101000-99115200 Weak transcription Fetal Lung lung
5 chr2:99101600-99121200 Weak transcription Gastric stomach
6 chr2:99101600-99131400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr2:99102200-99122200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr2:99103400-99115200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr2:99103600-99118400 Weak transcription HSMMtube muscle
10 chr2:99104000-99118400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr2:99105200-99120400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr2:99106000-99115200 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr2:99106800-99119600 Weak transcription Primary neutrophils fromperipheralblood blood
14 chr2:99106800-99119800 Weak transcription Pancreas Pancrea
15 chr2:99107000-99115000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr2:99108000-99115200 Weak transcription Small Intestine intestine
17 chr2:99108000-99120200 Weak transcription Esophagus oesophagus
18 chr2:99108200-99118400 Weak transcription Brain Angular Gyrus brain
19 chr2:99109400-99115000 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr2:99109400-99115800 ZNF genes & repeats GM12878-XiMat blood
21 chr2:99109600-99116800 Weak transcription Lung lung
22 chr2:99109800-99115200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr2:99111000-99118800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr2:99111600-99115200 Weak transcription Ovary ovary
25 chr2:99111600-99118400 Weak transcription Right Atrium heart
26 chr2:99111600-99118400 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr2:99111800-99115400 Weak transcription Stomach Smooth Muscle stomach
28 chr2:99111800-99118200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr2:99111800-99121200 Weak transcription K562 blood
30 chr2:99112000-99118400 Weak transcription Rectal Smooth Muscle rectum
31 chr2:99112200-99116800 Weak transcription Psoas Muscle Psoas
32 chr2:99112200-99130600 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr2:99112400-99115000 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr2:99112400-99118600 Weak transcription Colon Smooth Muscle Colon
35 chr2:99112800-99117200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr2:99112800-99118400 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr2:99113000-99115000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr2:99113000-99115200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
39 chr2:99113400-99115000 Strong transcription Primary T cells from cord blood blood
40 chr2:99113400-99115400 Weak transcription Fetal Brain Female brain
41 chr2:99113400-99118800 Weak transcription HUES48 Cell Line embryonic stem cell
42 chr2:99113600-99115600 Strong transcription Primary T cells fromperipheralblood blood
43 chr2:99113600-99117800 Weak transcription Primary T killer memory cells from peripheral blood blood
44 chr2:99113600-99118600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr2:99113600-99123600 Weak transcription H9 Cell Line embryonic stem cell
46 chr2:99114000-99115000 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr2:99114000-99115200 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr2:99114000-99116400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
49 chr2:99114000-99116600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr2:99114000-99116600 Weak transcription Thymus Thymus

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Last update: Aug 31, 2015