The 2.0 version of rSNPBase

Variant report

Variant rs72820002
Chromosome Location chr2:99075259-99075260
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:99063600-99075600 Weak transcription Brain Germinal Matrix brain
2 chr2:99065600-99079600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
3 chr2:99065600-99079600 Enhancers Primary T killer naive cells fromperipheralblood blood
4 chr2:99066200-99075800 Weak transcription Psoas Muscle Psoas
5 chr2:99066800-99075400 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr2:99068800-99079800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr2:99069600-99075600 Weak transcription Brain Angular Gyrus brain
8 chr2:99071200-99077200 Weak transcription Fetal Muscle Leg muscle
9 chr2:99071200-99079600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr2:99071200-99079800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr2:99071400-99076800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr2:99071600-99078000 Weak transcription Fetal Lung lung
13 chr2:99071600-99080200 Enhancers Primary T helper cells fromperipheralblood blood
14 chr2:99071800-99075400 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr2:99071800-99076800 Weak transcription Fetal Muscle Trunk muscle
16 chr2:99072000-99075400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr2:99072000-99075800 Weak transcription Colonic Mucosa Colon
18 chr2:99072000-99076400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr2:99072000-99079600 Weak transcription H9 Cell Line embryonic stem cell
20 chr2:99072200-99075800 Genic enhancers Fetal Thymus thymus
21 chr2:99072200-99076400 Genic enhancers Primary T helper naive cells fromperipheralblood blood
22 chr2:99072200-99081200 Weak transcription Fetal Brain Male brain
23 chr2:99072200-99083000 Weak transcription ES-WA7 Cell Line embryonic stem cell
24 chr2:99072200-99086200 Weak transcription Fetal Intestine Small intestine
25 chr2:99072400-99075400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr2:99072400-99075400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr2:99072400-99075400 Weak transcription Lung lung
28 chr2:99072400-99075600 Genic enhancers Primary T cells from cord blood blood
29 chr2:99072400-99075800 Genic enhancers Primary T cells fromperipheralblood blood
30 chr2:99072400-99078000 Enhancers Primary T helper naive cells from peripheral blood blood
31 chr2:99072400-99078000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
32 chr2:99072400-99079800 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr2:99072400-99095000 Weak transcription Fetal Intestine Large intestine
34 chr2:99072600-99075400 Enhancers Duodenum Mucosa Duodenum
35 chr2:99072600-99075400 Weak transcription Pancreas Pancrea
36 chr2:99072600-99075400 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr2:99072600-99075600 Genic enhancers Primary T helper cells PMA-I stimulated --
38 chr2:99072600-99075600 Weak transcription Brain Cingulate Gyrus brain
39 chr2:99072600-99075600 Weak transcription Brain Hippocampus Middle brain
40 chr2:99072600-99075600 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr2:99072600-99075800 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr2:99072600-99075800 Weak transcription Brain Anterior Caudate brain
43 chr2:99072600-99075800 Weak transcription Brain Inferior Temporal Lobe brain
44 chr2:99072600-99077000 Enhancers Primary T helper 17 cells PMA-I stimulated --
45 chr2:99072600-99077200 Weak transcription Liver Liver
46 chr2:99072600-99119600 Weak transcription Aorta Aorta
47 chr2:99072800-99075400 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr2:99072800-99075600 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr2:99072800-99075800 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr2:99072800-99077600 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015