The 2.0 version of rSNPBase

Variant report

Variant rs58778964
Chromosome Location chr2:99110599-99110600
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:99072600-99119600 Weak transcription Aorta Aorta
2 chr2:99096800-99113600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr2:99098400-99115200 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr2:99100000-99111000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr2:99100400-99121600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr2:99100600-99110600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr2:99101000-99115200 Weak transcription Fetal Lung lung
8 chr2:99101600-99111200 Weak transcription Fetal Brain Female brain
9 chr2:99101600-99121200 Weak transcription Gastric stomach
10 chr2:99101600-99131400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr2:99102200-99122200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr2:99103200-99113200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr2:99103400-99115200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr2:99103600-99113400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr2:99103600-99118400 Weak transcription HSMMtube muscle
16 chr2:99104000-99118400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr2:99104400-99110600 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr2:99104600-99110600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr2:99105000-99110600 Weak transcription H1 Cell Line embryonic stem cell
20 chr2:99105000-99110600 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr2:99105000-99110600 Weak transcription K562 blood
22 chr2:99105200-99110800 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr2:99105200-99120400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr2:99105400-99110600 Weak transcription Fetal Intestine Small intestine
25 chr2:99105400-99110600 Weak transcription Fetal Muscle Leg muscle
26 chr2:99105600-99110600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr2:99106000-99110600 Weak transcription HepG2 liver
28 chr2:99106000-99111400 Weak transcription Fetal Intestine Large intestine
29 chr2:99106000-99115200 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr2:99106600-99111600 Genic enhancers Primary T helper naive cells fromperipheralblood blood
31 chr2:99106800-99111200 Genic enhancers Primary T cells fromperipheralblood blood
32 chr2:99106800-99119600 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr2:99106800-99119800 Weak transcription Pancreas Pancrea
34 chr2:99107000-99111000 Strong transcription Monocytes-CD14+_RO01746 blood
35 chr2:99107000-99115000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr2:99107200-99111400 Weak transcription Rectal Smooth Muscle rectum
37 chr2:99107600-99111000 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr2:99108000-99110600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr2:99108000-99110600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr2:99108000-99110600 Weak transcription Thymus Thymus
41 chr2:99108000-99111600 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr2:99108000-99113200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
43 chr2:99108000-99115200 Weak transcription Small Intestine intestine
44 chr2:99108000-99120200 Weak transcription Esophagus oesophagus
45 chr2:99108200-99111000 Enhancers Primary T killer naive cells fromperipheralblood blood
46 chr2:99108200-99118400 Weak transcription Brain Angular Gyrus brain
47 chr2:99108800-99110600 Weak transcription Primary monocytes fromperipheralblood blood
48 chr2:99108800-99111600 Enhancers Left Ventricle heart
49 chr2:99109000-99110600 Enhancers Primary Natural Killer cells fromperipheralblood blood
50 chr2:99109200-99110600 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015