The 2.0 version of rSNPBase

Variant report

Variant rs11956900
Chromosome Location chr5:108324238-108324239
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:108279200-108325600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr5:108282200-108324600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
3 chr5:108282400-108327200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr5:108290000-108328800 Weak transcription Esophagus oesophagus
5 chr5:108293400-108325600 Weak transcription NHEK skin
6 chr5:108294400-108329400 Weak transcription Brain Hippocampus Middle brain
7 chr5:108299600-108328800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr5:108301400-108328600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr5:108301600-108361200 Weak transcription Primary T cells from cord blood blood
10 chr5:108302200-108330200 Weak transcription Stomach Smooth Muscle stomach
11 chr5:108303000-108329000 Weak transcription Gastric stomach
12 chr5:108303200-108331800 Weak transcription Ovary ovary
13 chr5:108304000-108328800 Weak transcription Fetal Intestine Small intestine
14 chr5:108308400-108328800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr5:108308400-108336000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr5:108309800-108333600 Weak transcription Fetal Muscle Trunk muscle
17 chr5:108314200-108329400 Weak transcription Adipose Nuclei Adipose
18 chr5:108317800-108329200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr5:108319000-108325600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr5:108319600-108325400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr5:108319600-108325600 Weak transcription Muscle Satellite Cultured Cells --
22 chr5:108319800-108325200 Weak transcription NHDF-Ad bronchial
23 chr5:108319800-108340800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr5:108320000-108335000 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr5:108321600-108329400 Weak transcription Fetal Lung lung
26 chr5:108322800-108325400 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr5:108322800-108329400 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr5:108323200-108325600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr5:108323200-108325800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr5:108323800-108329000 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015