The 2.0 version of rSNPBase

Variant report

Variant rs6867147
Chromosome Location chr5:108322239-108322240
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:108203800-108323400 Weak transcription Primary B cells from cord blood blood
2 chr5:108217600-108323200 Weak transcription Left Ventricle heart
3 chr5:108277600-108322400 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr5:108279200-108325600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr5:108282200-108324600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr5:108282400-108327200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr5:108290000-108328800 Weak transcription Esophagus oesophagus
8 chr5:108293400-108325600 Weak transcription NHEK skin
9 chr5:108294400-108329400 Weak transcription Brain Hippocampus Middle brain
10 chr5:108299600-108328800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr5:108301400-108328600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr5:108301600-108361200 Weak transcription Primary T cells from cord blood blood
13 chr5:108302200-108330200 Weak transcription Stomach Smooth Muscle stomach
14 chr5:108303000-108329000 Weak transcription Gastric stomach
15 chr5:108303200-108322400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr5:108303200-108331800 Weak transcription Ovary ovary
17 chr5:108304000-108328800 Weak transcription Fetal Intestine Small intestine
18 chr5:108308400-108328800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr5:108308400-108336000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr5:108309800-108333600 Weak transcription Fetal Muscle Trunk muscle
21 chr5:108310000-108323400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr5:108310200-108322400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr5:108310200-108322400 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr5:108310400-108322400 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr5:108313200-108322400 Weak transcription Psoas Muscle Psoas
26 chr5:108314200-108329400 Weak transcription Adipose Nuclei Adipose
27 chr5:108317600-108322400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr5:108317800-108329200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr5:108319000-108325600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr5:108319600-108325400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr5:108319600-108325600 Weak transcription Muscle Satellite Cultured Cells --
32 chr5:108319800-108325200 Weak transcription NHDF-Ad bronchial
33 chr5:108319800-108340800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr5:108320000-108335000 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr5:108321600-108322400 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr5:108321600-108322400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr5:108321600-108329400 Weak transcription Fetal Lung lung
38 chr5:108322200-108322800 ZNF genes & repeats Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015