Variant report
| Variant | rs72789339 |
|---|---|
| Chromosome Location | chr5:108313550-108313551 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:108203800-108323400 | Weak transcription | Primary B cells from cord blood | blood |
| 2 | chr5:108217600-108323200 | Weak transcription | Left Ventricle | heart |
| 3 | chr5:108277600-108322400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 4 | chr5:108279200-108325600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 5 | chr5:108282200-108324600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 6 | chr5:108282400-108327200 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 7 | chr5:108283400-108319000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 8 | chr5:108289200-108318600 | Weak transcription | NHDF-Ad | bronchial |
| 9 | chr5:108290000-108313600 | Weak transcription | Aorta | Aorta |
| 10 | chr5:108290000-108322000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 11 | chr5:108290000-108328800 | Weak transcription | Esophagus | oesophagus |
| 12 | chr5:108293400-108325600 | Weak transcription | NHEK | skin |
| 13 | chr5:108294400-108329400 | Weak transcription | Brain Hippocampus Middle | brain |
| 14 | chr5:108295200-108319400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 15 | chr5:108295800-108316600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 16 | chr5:108298000-108316400 | Weak transcription | Brain Substantia Nigra | brain |
| 17 | chr5:108298200-108315800 | Weak transcription | HepG2 | liver |
| 18 | chr5:108299600-108328800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 19 | chr5:108300400-108314200 | Weak transcription | NH-A | brain |
| 20 | chr5:108301400-108328600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 21 | chr5:108301600-108361200 | Weak transcription | Primary T cells from cord blood | blood |
| 22 | chr5:108301800-108318600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 23 | chr5:108302200-108330200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 24 | chr5:108303000-108313600 | Weak transcription | Lung | lung |
| 25 | chr5:108303000-108318800 | Weak transcription | Brain Angular Gyrus | brain |
| 26 | chr5:108303000-108319400 | Weak transcription | HSMM | muscle |
| 27 | chr5:108303000-108329000 | Weak transcription | Gastric | stomach |
| 28 | chr5:108303200-108315400 | Weak transcription | Fetal Stomach | stomach |
| 29 | chr5:108303200-108318800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 30 | chr5:108303200-108321200 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 31 | chr5:108303200-108322200 | Weak transcription | Pancreas | Pancrea |
| 32 | chr5:108303200-108322400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 33 | chr5:108303200-108331800 | Weak transcription | Ovary | ovary |
| 34 | chr5:108303600-108315600 | Weak transcription | HMEC | breast |
| 35 | chr5:108303800-108321000 | Weak transcription | Fetal Lung | lung |
| 36 | chr5:108303800-108322000 | Weak transcription | Primary hematopoietic stem cells | blood |
| 37 | chr5:108303800-108322200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 38 | chr5:108304000-108328800 | Weak transcription | Fetal Intestine Small | intestine |
| 39 | chr5:108308400-108328800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 40 | chr5:108308400-108336000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 41 | chr5:108309800-108333600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 42 | chr5:108310000-108323400 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 43 | chr5:108310200-108322400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 44 | chr5:108310200-108322400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 45 | chr5:108310400-108322400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 46 | chr5:108311200-108313600 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 47 | chr5:108311400-108314400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 48 | chr5:108311600-108321200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 49 | chr5:108313200-108322400 | Weak transcription | Psoas Muscle | Psoas |
| 50 | chr5:108313400-108314200 | Strong transcription | Adipose Nuclei | Adipose |
