The 2.0 version of rSNPBase

Variant report

Variant rs11973853
Chromosome Location chr7:99521761-99521762
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:99517600-99524400 Weak transcription H9 Cell Line embryonic stem cell
2 chr7:99517600-99526800 Weak transcription Gastric stomach
3 chr7:99517800-99526600 Weak transcription Esophagus oesophagus
4 chr7:99517800-99526600 Weak transcription Fetal Muscle Trunk muscle
5 chr7:99518000-99526600 Weak transcription Fetal Stomach stomach
6 chr7:99518200-99521800 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr7:99518200-99522000 Weak transcription Primary T cells from cord blood blood
8 chr7:99518200-99522000 Weak transcription Primary T cells fromperipheralblood blood
9 chr7:99518200-99522000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr7:99518200-99522400 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr7:99518200-99523000 Weak transcription Fetal Intestine Large intestine
12 chr7:99518200-99523000 Weak transcription Osteobl bone
13 chr7:99518200-99523600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr7:99518200-99523600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr7:99518200-99524000 Weak transcription HMEC breast
16 chr7:99518200-99524200 Weak transcription Stomach Smooth Muscle stomach
17 chr7:99518200-99524400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr7:99518200-99525800 Weak transcription Adipose Nuclei Adipose
19 chr7:99518200-99526600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr7:99518200-99526800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr7:99518200-99526800 Weak transcription Brain Anterior Caudate brain
22 chr7:99518200-99526800 Weak transcription Brain Hippocampus Middle brain
23 chr7:99518200-99527000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr7:99518200-99527000 Weak transcription Brain Inferior Temporal Lobe brain
25 chr7:99518400-99522000 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr7:99518400-99523800 Weak transcription NHEK skin
27 chr7:99518400-99526800 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr7:99518400-99526800 Weak transcription Rectal Smooth Muscle rectum
29 chr7:99518600-99523000 Weak transcription GM12878-XiMat blood
30 chr7:99518600-99526400 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr7:99519400-99522800 Weak transcription Fetal Lung lung
32 chr7:99519400-99523800 Weak transcription NHLF lung
33 chr7:99519600-99521800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr7:99519600-99522200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr7:99519600-99522400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr7:99519600-99523600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr7:99519600-99526200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr7:99519800-99522200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr7:99519800-99522200 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr7:99519800-99526800 Weak transcription HSMM muscle

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Last update: Aug 31, 2015