The 2.0 version of rSNPBase

Variant report

Variant rs11992578
Chromosome Location chr8:127858621-127858622
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:21 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:127847600-127860000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr8:127857000-127859600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr8:127857200-127859000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr8:127857400-127862000 Weak transcription Fetal Kidney kidney
5 chr8:127857600-127859000 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr8:127857600-127859200 Weak transcription Psoas Muscle Psoas
7 chr8:127857600-127859200 Enhancers NHEK skin
8 chr8:127857600-127861400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr8:127857800-127858800 Weak transcription Adipose Nuclei Adipose
10 chr8:127857800-127859000 Weak transcription Fetal Muscle Trunk muscle
11 chr8:127857800-127859800 Enhancers HSMMtube muscle
12 chr8:127857800-127860200 Enhancers Fetal Muscle Leg muscle
13 chr8:127858000-127860200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr8:127858000-127860200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
15 chr8:127858000-127866400 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr8:127858200-127859400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
17 chr8:127858400-127859600 Enhancers Cortex derived primary cultured neurospheres brain
18 chr8:127858400-127861000 Weak transcription Muscle Satellite Cultured Cells --
19 chr8:127858600-127860000 Weak transcription HMEC breast
20 chr8:127858600-127861000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr8:127858600-127869400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015