The 2.0 version of rSNPBase

Variant report

Variant rs12025668
Chromosome Location chr1:67013278-67013279
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67000400-67022000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:67000800-67029800 Weak transcription Primary hematopoietic stem cells blood
3 chr1:67001200-67022000 Weak transcription Right Ventricle heart
4 chr1:67007000-67021800 Weak transcription H9 Cell Line embryonic stem cell
5 chr1:67007200-67018000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr1:67008400-67018000 Weak transcription Lung lung
7 chr1:67009000-67019600 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr1:67009400-67013800 Enhancers Brain Inferior Temporal Lobe brain
9 chr1:67009600-67018200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr1:67009600-67019600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:67009800-67028200 Weak transcription Brain Germinal Matrix brain
12 chr1:67010000-67013400 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr1:67010000-67018600 Weak transcription Muscle Satellite Cultured Cells --
14 chr1:67010000-67018600 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr1:67010000-67029000 Weak transcription Fetal Kidney kidney
16 chr1:67010800-67018600 Weak transcription Osteobl bone
17 chr1:67011000-67028000 Weak transcription HUVEC blood vessel
18 chr1:67011200-67021800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr1:67011200-67022000 Weak transcription Pancreas Pancrea
20 chr1:67011400-67017800 Weak transcription Left Ventricle heart
21 chr1:67011600-67017600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr1:67011800-67029800 Weak transcription Fetal Brain Male brain
23 chr1:67012200-67017800 Weak transcription NHDF-Ad bronchial
24 chr1:67012400-67013400 Weak transcription Brain Hippocampus Middle brain
25 chr1:67012400-67013400 Weak transcription Brain Substantia Nigra brain
26 chr1:67012400-67014400 Weak transcription Fetal Heart heart
27 chr1:67012400-67015400 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr1:67012400-67018000 Weak transcription Fetal Lung lung
29 chr1:67012400-67021400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr1:67012800-67014000 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
31 chr1:67013000-67018000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr1:67013200-67013400 Enhancers Brain Cingulate Gyrus brain
33 chr1:67013200-67013600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr1:67013200-67013600 Genic enhancers NHLF lung
35 chr1:67013200-67013800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
36 chr1:67013200-67013800 Enhancers Aorta Aorta
37 chr1:67013200-67013800 Enhancers Brain Anterior Caudate brain
38 chr1:67013200-67013800 Enhancers Esophagus oesophagus
39 chr1:67013200-67014000 Enhancers Brain Angular Gyrus brain

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Last update: Aug 31, 2015