The 2.0 version of rSNPBase

Variant report

Variant rs12026000
Chromosome Location chr1:185091952-185091953
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:185018400-185101800 Weak transcription Fetal Brain Male brain
2 chr1:185054400-185101800 Weak transcription A549 lung
3 chr1:185055400-185096200 Weak transcription Hela-S3 cervix
4 chr1:185056200-185124200 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr1:185057600-185094600 Weak transcription Muscle Satellite Cultured Cells --
6 chr1:185058800-185093600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr1:185059000-185124800 Weak transcription H9 Cell Line embryonic stem cell
8 chr1:185067800-185095400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr1:185068400-185110200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr1:185070000-185101400 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr1:185073600-185092800 Weak transcription Fetal Kidney kidney
12 chr1:185073600-185115000 Weak transcription NH-A brain
13 chr1:185078800-185102000 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr1:185079800-185102000 Weak transcription Small Intestine intestine
15 chr1:185080000-185101000 Weak transcription Placenta Amnion Placenta Amnion
16 chr1:185081800-185092800 Weak transcription HUVEC blood vessel
17 chr1:185082000-185092800 Weak transcription K562 blood
18 chr1:185082200-185095200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:185082400-185093600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr1:185082600-185100400 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr1:185082600-185101400 Weak transcription Esophagus oesophagus
22 chr1:185082600-185125400 Weak transcription Spleen Spleen
23 chr1:185083400-185093400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr1:185084200-185103400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr1:185084200-185124400 Weak transcription Right Ventricle heart
26 chr1:185084400-185093000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr1:185084600-185102400 Weak transcription Aorta Aorta
28 chr1:185084600-185104200 Weak transcription Pancreas Pancrea
29 chr1:185085000-185121400 Weak transcription NHEK skin
30 chr1:185085400-185125000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:185085600-185094400 Weak transcription Lung lung
32 chr1:185086000-185101000 Strong transcription Monocytes-CD14+_RO01746 blood
33 chr1:185086000-185107000 Strong transcription Liver Liver
34 chr1:185086000-185120200 Strong transcription Primary neutrophils fromperipheralblood blood
35 chr1:185086200-185101000 Weak transcription Thymus Thymus
36 chr1:185086200-185101200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr1:185086400-185098000 Strong transcription Placenta Placenta
38 chr1:185086400-185100000 Strong transcription Primary B cells from peripheral blood blood
39 chr1:185086600-185099800 Strong transcription Adipose Nuclei Adipose
40 chr1:185086600-185100000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
41 chr1:185086800-185098000 Strong transcription Primary monocytes fromperipheralblood blood
42 chr1:185087000-185125000 Weak transcription Gastric stomach
43 chr1:185087200-185092800 Weak transcription Colon Smooth Muscle Colon
44 chr1:185087200-185095200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr1:185087200-185101800 Weak transcription HMEC breast
46 chr1:185087400-185093600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr1:185087600-185092800 Weak transcription Fetal Brain Female brain
48 chr1:185087600-185117000 Weak transcription Primary T killer memory cells from peripheral blood blood
49 chr1:185087800-185093400 Weak transcription Fetal Stomach stomach
50 chr1:185087800-185104000 Weak transcription ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015