The 2.0 version of rSNPBase

Variant report

Variant rs12039657
Chromosome Location chr1:185045808-185045809
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:185016400-185057000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr1:185016400-185067200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:185016400-185073800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr1:185016600-185057000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr1:185018400-185101800 Weak transcription Fetal Brain Male brain
6 chr1:185021600-185057200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr1:185024200-185056600 Weak transcription Primary T cells fromperipheralblood blood
8 chr1:185027200-185056400 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr1:185027200-185056400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr1:185028200-185058200 Weak transcription Brain Substantia Nigra brain
11 chr1:185030200-185076600 Weak transcription Gastric stomach
12 chr1:185032200-185057800 Weak transcription Primary B cells from peripheral blood blood
13 chr1:185032800-185056600 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr1:185034800-185057400 Weak transcription Fetal Brain Female brain
15 chr1:185034800-185077000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr1:185035000-185056600 Weak transcription Fetal Muscle Leg muscle
17 chr1:185035000-185058000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr1:185035200-185056600 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr1:185035400-185057000 Weak transcription Fetal Intestine Large intestine
20 chr1:185035800-185052600 Weak transcription Primary T helper cells PMA-I stimulated --
21 chr1:185035800-185056400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr1:185035800-185057800 Weak transcription Fetal Lung lung
23 chr1:185036000-185056600 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr1:185036000-185056600 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr1:185037400-185056800 Weak transcription Placenta Placenta
26 chr1:185037800-185052600 Weak transcription Aorta Aorta
27 chr1:185037800-185056400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:185037800-185056800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr1:185037800-185065400 Weak transcription HMEC breast
30 chr1:185038400-185063600 Weak transcription Psoas Muscle Psoas
31 chr1:185038600-185063600 Weak transcription Left Ventricle heart
32 chr1:185038800-185053400 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr1:185041000-185056400 Weak transcription Primary T cells from cord blood blood
34 chr1:185041200-185048400 Weak transcription K562 blood
35 chr1:185041200-185056400 Weak transcription Primary hematopoietic stem cells blood
36 chr1:185041200-185056600 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr1:185041600-185056600 Weak transcription Primary B cells from cord blood blood
38 chr1:185043200-185055600 Weak transcription ES-WA7 Cell Line embryonic stem cell
39 chr1:185043600-185046400 Enhancers HUES64 Cell Line embryonic stem cell
40 chr1:185043600-185056600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr1:185043600-185069400 Weak transcription Pancreas Pancrea
42 chr1:185044000-185046600 Enhancers iPS-18 Cell Line embryonic stem cell
43 chr1:185044000-185065200 Weak transcription NHEK skin
44 chr1:185044200-185046200 Enhancers HUES48 Cell Line embryonic stem cell
45 chr1:185044400-185050800 Weak transcription Fetal Intestine Small intestine
46 chr1:185044400-185057400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr1:185044800-185046400 Enhancers iPS-20b Cell Line embryonic stem cell
48 chr1:185044800-185047800 Enhancers iPS-15b Cell Line embryonic stem cell
49 chr1:185044800-185056200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr1:185044800-185056600 Weak transcription Fetal Adrenal Gland Adrenal Gland

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015