The 2.0 version of rSNPBase

Variant report

Variant rs16865296
Chromosome Location chr1:185069843-185069844
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:185016400-185073800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr1:185018400-185101800 Weak transcription Fetal Brain Male brain
3 chr1:185030200-185076600 Weak transcription Gastric stomach
4 chr1:185034800-185077000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:185052000-185076200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr1:185052400-185074800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr1:185052800-185070800 Weak transcription Small Intestine intestine
8 chr1:185052800-185076600 Weak transcription Rectal Smooth Muscle rectum
9 chr1:185053600-185070800 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr1:185054200-185073200 Weak transcription Brain Anterior Caudate brain
11 chr1:185054200-185073800 Weak transcription Placenta Amnion Placenta Amnion
12 chr1:185054400-185101800 Weak transcription A549 lung
13 chr1:185054800-185072400 Weak transcription HepG2 liver
14 chr1:185055000-185070200 Weak transcription Colon Smooth Muscle Colon
15 chr1:185055200-185070200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr1:185055200-185076600 Weak transcription Lung lung
17 chr1:185055400-185096200 Weak transcription Hela-S3 cervix
18 chr1:185056000-185076800 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr1:185056200-185072400 Strong transcription HUES64 Cell Line embryonic stem cell
20 chr1:185056200-185074200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr1:185056200-185124200 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr1:185056400-185071400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr1:185056400-185073800 Strong transcription iPS-20b Cell Line embryonic stem cell
24 chr1:185056400-185074000 Strong transcription Primary monocytes fromperipheralblood blood
25 chr1:185056600-185074000 Strong transcription Monocytes-CD14+_RO01746 blood
26 chr1:185056600-185077000 Weak transcription Thymus Thymus
27 chr1:185057200-185073400 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr1:185057200-185074000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr1:185057600-185094600 Weak transcription Muscle Satellite Cultured Cells --
30 chr1:185058200-185074800 Weak transcription ES-I3 Cell Line embryonic stem cell
31 chr1:185058600-185072800 Weak transcription NHLF lung
32 chr1:185058600-185089000 Weak transcription Ovary ovary
33 chr1:185058800-185075800 Weak transcription Brain Inferior Temporal Lobe brain
34 chr1:185058800-185075800 Weak transcription Stomach Smooth Muscle stomach
35 chr1:185058800-185093600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr1:185059000-185073400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr1:185059000-185076200 Weak transcription Brain Germinal Matrix brain
38 chr1:185059000-185124800 Weak transcription H9 Cell Line embryonic stem cell
39 chr1:185059600-185070000 Strong transcription Primary B cells from cord blood blood
40 chr1:185060600-185070000 Strong transcription iPS-18 Cell Line embryonic stem cell
41 chr1:185060800-185074000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
42 chr1:185061600-185070400 Weak transcription Fetal Intestine Small intestine
43 chr1:185061800-185070600 Strong transcription Primary T regulatory cells fromperipheralblood blood
44 chr1:185063000-185076600 Weak transcription Fetal Brain Female brain
45 chr1:185064600-185073400 Weak transcription Left Ventricle heart
46 chr1:185064600-185075200 Weak transcription Psoas Muscle Psoas
47 chr1:185064800-185071000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr1:185064800-185073400 Weak transcription Fetal Kidney kidney
49 chr1:185065800-185070600 Strong transcription Primary neutrophils fromperipheralblood blood
50 chr1:185065800-185088600 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015