The 2.0 version of rSNPBase

Variant report

Variant rs1008502
Chromosome Location chr1:185018686-185018687
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:185015600-185018800 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr1:185015600-185034200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:185015600-185037000 Weak transcription Spleen Spleen
4 chr1:185015600-185037600 Weak transcription Pancreas Pancrea
5 chr1:185015800-185018800 Weak transcription Left Ventricle heart
6 chr1:185015800-185023400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:185015800-185037600 Weak transcription Aorta Aorta
8 chr1:185015800-185043400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr1:185016000-185025600 Weak transcription Ovary ovary
10 chr1:185016000-185026600 Weak transcription Psoas Muscle Psoas
11 chr1:185016000-185026600 Weak transcription Right Atrium heart
12 chr1:185016000-185034400 Weak transcription Fetal Muscle Trunk muscle
13 chr1:185016200-185023600 Weak transcription Primary T cells fromperipheralblood blood
14 chr1:185016400-185019200 Enhancers Fetal Muscle Leg muscle
15 chr1:185016400-185022600 Weak transcription Placenta Placenta
16 chr1:185016400-185030000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr1:185016400-185057000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr1:185016400-185067200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr1:185016400-185073800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr1:185016600-185019800 Weak transcription Primary T helper naive cells from peripheral blood blood
21 chr1:185016600-185020200 Weak transcription Brain Angular Gyrus brain
22 chr1:185016600-185020200 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr1:185016600-185022600 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr1:185016600-185026600 Weak transcription Primary B cells from peripheral blood blood
25 chr1:185016600-185026600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr1:185016600-185026800 Weak transcription H1 Cell Line embryonic stem cell
27 chr1:185016600-185057000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr1:185016800-185019000 Weak transcription Adipose Nuclei Adipose
29 chr1:185016800-185020200 Weak transcription A549 lung
30 chr1:185016800-185028600 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr1:185017000-185019200 Weak transcription Monocytes-CD14+_RO01746 blood
32 chr1:185017000-185019600 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr1:185017000-185020200 Weak transcription Brain Cingulate Gyrus brain
34 chr1:185017200-185020200 Weak transcription Brain Germinal Matrix brain
35 chr1:185017200-185020600 Enhancers iPS-15b Cell Line embryonic stem cell
36 chr1:185017200-185027400 Weak transcription Colon Smooth Muscle Colon
37 chr1:185017200-185037400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr1:185017400-185019000 Weak transcription Primary monocytes fromperipheralblood blood
39 chr1:185017400-185019600 Weak transcription Fetal Brain Female brain
40 chr1:185017400-185020000 Weak transcription Brain Substantia Nigra brain
41 chr1:185017400-185020200 Weak transcription Brain Hippocampus Middle brain
42 chr1:185017400-185020400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr1:185017400-185021200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr1:185017400-185021400 Weak transcription Fetal Kidney kidney
45 chr1:185017400-185021800 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr1:185017400-185023400 Weak transcription Fetal Intestine Large intestine
47 chr1:185017400-185026600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr1:185017400-185026600 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr1:185017400-185026600 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr1:185017400-185026800 Weak transcription Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015