The 2.0 version of rSNPBase

Variant report

Variant rs41264590
Chromosome Location chr1:185098098-185098099
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:185018400-185101800 Weak transcription Fetal Brain Male brain
2 chr1:185054400-185101800 Weak transcription A549 lung
3 chr1:185056200-185124200 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr1:185059000-185124800 Weak transcription H9 Cell Line embryonic stem cell
5 chr1:185068400-185110200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr1:185070000-185101400 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr1:185073600-185115000 Weak transcription NH-A brain
8 chr1:185078800-185102000 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr1:185079800-185102000 Weak transcription Small Intestine intestine
10 chr1:185080000-185101000 Weak transcription Placenta Amnion Placenta Amnion
11 chr1:185082600-185100400 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr1:185082600-185101400 Weak transcription Esophagus oesophagus
13 chr1:185082600-185125400 Weak transcription Spleen Spleen
14 chr1:185084200-185103400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr1:185084200-185124400 Weak transcription Right Ventricle heart
16 chr1:185084600-185102400 Weak transcription Aorta Aorta
17 chr1:185084600-185104200 Weak transcription Pancreas Pancrea
18 chr1:185085000-185121400 Weak transcription NHEK skin
19 chr1:185085400-185125000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:185086000-185101000 Strong transcription Monocytes-CD14+_RO01746 blood
21 chr1:185086000-185107000 Strong transcription Liver Liver
22 chr1:185086000-185120200 Strong transcription Primary neutrophils fromperipheralblood blood
23 chr1:185086200-185101000 Weak transcription Thymus Thymus
24 chr1:185086200-185101200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr1:185086400-185100000 Strong transcription Primary B cells from peripheral blood blood
26 chr1:185086600-185099800 Strong transcription Adipose Nuclei Adipose
27 chr1:185086600-185100000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
28 chr1:185087000-185125000 Weak transcription Gastric stomach
29 chr1:185087200-185101800 Weak transcription HMEC breast
30 chr1:185087600-185117000 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr1:185087800-185104000 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr1:185088000-185098600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr1:185088000-185107800 Strong transcription Primary T helper cells fromperipheralblood blood
34 chr1:185088200-185099600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr1:185088200-185100200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr1:185088200-185120600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr1:185088400-185100200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr1:185088600-185099400 Strong transcription HUES64 Cell Line embryonic stem cell
39 chr1:185088600-185099400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr1:185088600-185099600 Strong transcription Primary B cells from cord blood blood
41 chr1:185088600-185100200 Strong transcription Duodenum Smooth Muscle Duodenum
42 chr1:185088600-185101800 Strong transcription Primary hematopoietic stem cells short term culture blood
43 chr1:185088600-185106400 Strong transcription Primary T helper cells PMA-I stimulated --
44 chr1:185088800-185099400 Strong transcription Skeletal Muscle Female skeletal muscle
45 chr1:185088800-185100000 Strong transcription Primary T cells fromperipheralblood blood
46 chr1:185089000-185099400 Weak transcription Psoas Muscle Psoas
47 chr1:185089200-185098400 Strong transcription HUES48 Cell Line embryonic stem cell
48 chr1:185089400-185098800 Weak transcription NHLF lung
49 chr1:185089400-185101800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr1:185089400-185124400 Weak transcription Colonic Mucosa Colon

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Last update: Aug 31, 2015