The 2.0 version of rSNPBase

Variant report

Variant rs12030778
Chromosome Location chr1:185102041-185102042
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:185056200-185124200 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr1:185059000-185124800 Weak transcription H9 Cell Line embryonic stem cell
3 chr1:185068400-185110200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr1:185073600-185115000 Weak transcription NH-A brain
5 chr1:185082600-185125400 Weak transcription Spleen Spleen
6 chr1:185084200-185103400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr1:185084200-185124400 Weak transcription Right Ventricle heart
8 chr1:185084600-185102400 Weak transcription Aorta Aorta
9 chr1:185084600-185104200 Weak transcription Pancreas Pancrea
10 chr1:185085000-185121400 Weak transcription NHEK skin
11 chr1:185085400-185125000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr1:185086000-185107000 Strong transcription Liver Liver
13 chr1:185086000-185120200 Strong transcription Primary neutrophils fromperipheralblood blood
14 chr1:185087000-185125000 Weak transcription Gastric stomach
15 chr1:185087600-185117000 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr1:185087800-185104000 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr1:185088000-185107800 Strong transcription Primary T helper cells fromperipheralblood blood
18 chr1:185088200-185120600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr1:185088600-185106400 Strong transcription Primary T helper cells PMA-I stimulated --
20 chr1:185089400-185124400 Weak transcription Colonic Mucosa Colon
21 chr1:185089600-185121400 Weak transcription Stomach Mucosa stomach
22 chr1:185090000-185103800 Strong transcription Primary T regulatory cells fromperipheralblood blood
23 chr1:185091200-185121400 Weak transcription Fetal Heart heart
24 chr1:185093800-185103600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
25 chr1:185093800-185113400 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr1:185093800-185117400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr1:185094000-185110800 Weak transcription Brain Angular Gyrus brain
28 chr1:185094000-185113000 Weak transcription Colon Smooth Muscle Colon
29 chr1:185094200-185116600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr1:185094200-185118400 Weak transcription H1 Cell Line embryonic stem cell
31 chr1:185096600-185121400 Weak transcription Hela-S3 cervix
32 chr1:185097600-185104000 Weak transcription Brain Cingulate Gyrus brain
33 chr1:185098600-185103200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr1:185099400-185103000 Weak transcription Osteobl bone
35 chr1:185099800-185102400 Weak transcription Left Ventricle heart
36 chr1:185100000-185110800 Weak transcription NHLF lung
37 chr1:185100400-185102200 Weak transcription Lung lung
38 chr1:185100400-185105600 Strong transcription HUES6 Cell Line embryonic stem cell
39 chr1:185100400-185106400 Strong transcription Cortex derived primary cultured neurospheres brain
40 chr1:185100600-185103200 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr1:185100800-185105800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
42 chr1:185100800-185111200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr1:185101000-185102600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
44 chr1:185101000-185102600 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
45 chr1:185101000-185102600 ZNF genes & repeats Fetal Muscle Leg muscle
46 chr1:185101000-185102800 ZNF genes & repeats Fetal Intestine Large intestine
47 chr1:185101000-185102800 Strong transcription Placenta Amnion Placenta Amnion
48 chr1:185101000-185103000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr1:185101000-185103000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr1:185101000-185103200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015