The 2.0 version of rSNPBase

Variant report

Variant rs12030761
Chromosome Location chr1:185030385-185030386
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:185015600-185034200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:185015600-185037000 Weak transcription Spleen Spleen
3 chr1:185015600-185037600 Weak transcription Pancreas Pancrea
4 chr1:185015800-185037600 Weak transcription Aorta Aorta
5 chr1:185015800-185043400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:185016000-185034400 Weak transcription Fetal Muscle Trunk muscle
7 chr1:185016400-185057000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr1:185016400-185067200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:185016400-185073800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr1:185016600-185057000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr1:185017200-185037400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:185017400-185031000 Weak transcription Stomach Mucosa stomach
13 chr1:185017400-185037200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr1:185017400-185037400 Weak transcription NHEK skin
15 chr1:185017400-185042800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr1:185017600-185034200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr1:185018400-185043000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr1:185018400-185043200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr1:185018400-185101800 Weak transcription Fetal Brain Male brain
20 chr1:185019000-185034600 Weak transcription Lung lung
21 chr1:185019200-185037600 Weak transcription Left Ventricle heart
22 chr1:185020200-185030800 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr1:185020400-185039000 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr1:185020600-185040200 Weak transcription Brain Angular Gyrus brain
25 chr1:185020800-185031200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr1:185021600-185057200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr1:185024000-185033000 Weak transcription Fetal Intestine Large intestine
28 chr1:185024200-185044000 Weak transcription Fetal Stomach stomach
29 chr1:185024200-185056600 Weak transcription Primary T cells fromperipheralblood blood
30 chr1:185026600-185033200 Enhancers Primary monocytes fromperipheralblood blood
31 chr1:185026600-185033200 Enhancers Primary T helper cells PMA-I stimulated --
32 chr1:185026800-185031400 Enhancers Primary T helper naive cells fromperipheralblood blood
33 chr1:185027000-185033200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr1:185027200-185030800 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr1:185027200-185032600 Weak transcription Fetal Muscle Leg muscle
36 chr1:185027200-185056400 Weak transcription Primary T regulatory cells fromperipheralblood blood
37 chr1:185027200-185056400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr1:185027400-185034600 Weak transcription Ovary ovary
39 chr1:185027400-185038000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr1:185027400-185040000 Weak transcription H1 Cell Line embryonic stem cell
41 chr1:185027600-185039000 Weak transcription Rectal Smooth Muscle rectum
42 chr1:185028200-185030600 Weak transcription Primary T cells from cord blood blood
43 chr1:185028200-185030800 Weak transcription iPS-20b Cell Line embryonic stem cell
44 chr1:185028200-185032000 Weak transcription GM12878-XiMat blood
45 chr1:185028200-185035200 Weak transcription Fetal Lung lung
46 chr1:185028200-185037600 Weak transcription Brain Hippocampus Middle brain
47 chr1:185028200-185039400 Weak transcription ES-I3 Cell Line embryonic stem cell
48 chr1:185028200-185058200 Weak transcription Brain Substantia Nigra brain
49 chr1:185028400-185030600 Weak transcription Primary B cells from cord blood blood
50 chr1:185028400-185031800 Weak transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015