The 2.0 version of rSNPBase

Variant report

Variant rs12355862
Chromosome Location chr10:27309566-27309567
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:27257600-27319000 Weak transcription Stomach Smooth Muscle stomach
2 chr10:27283200-27388400 Weak transcription Psoas Muscle Psoas
3 chr10:27284400-27310400 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr10:27285000-27319200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr10:27285400-27312000 Weak transcription Brain Hippocampus Middle brain
6 chr10:27285400-27319200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr10:27286400-27310000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr10:27286400-27316600 Weak transcription Duodenum Mucosa Duodenum
9 chr10:27286600-27311800 Weak transcription Primary T cells fromperipheralblood blood
10 chr10:27286600-27312000 Weak transcription Fetal Thymus thymus
11 chr10:27287000-27312000 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr10:27287000-27350600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr10:27287800-27310000 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr10:27287800-27350600 Weak transcription Aorta Aorta
15 chr10:27288400-27329400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr10:27288600-27312000 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr10:27288600-27312000 Weak transcription Primary T helper cells fromperipheralblood blood
18 chr10:27288800-27357000 Weak transcription Gastric stomach
19 chr10:27289200-27361200 Weak transcription Brain Cingulate Gyrus brain
20 chr10:27289600-27309800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr10:27289600-27310000 Weak transcription HSMMtube muscle
22 chr10:27289600-27312400 Weak transcription Brain Substantia Nigra brain
23 chr10:27289600-27314200 Weak transcription Spleen Spleen
24 chr10:27289600-27318800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr10:27289600-27360800 Weak transcription Hela-S3 cervix
26 chr10:27289800-27360800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr10:27290200-27351400 Weak transcription Thymus Thymus
28 chr10:27290200-27361400 Weak transcription Placenta Placenta
29 chr10:27290400-27309600 Weak transcription H9 Cell Line embryonic stem cell
30 chr10:27290600-27310000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr10:27290600-27314800 Weak transcription Fetal Kidney kidney
32 chr10:27290800-27326800 Weak transcription Osteobl bone
33 chr10:27291000-27310200 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr10:27291000-27312200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr10:27291200-27316600 Weak transcription H1 Cell Line embryonic stem cell
36 chr10:27291200-27324000 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr10:27291400-27324000 Weak transcription Brain Germinal Matrix brain
38 chr10:27291400-27324200 Weak transcription Primary hematopoietic stem cells blood
39 chr10:27291400-27360600 Weak transcription Lung lung
40 chr10:27291600-27312600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr10:27291600-27314600 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr10:27291600-27316400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr10:27291600-27321200 Weak transcription Fetal Intestine Small intestine
44 chr10:27291600-27325200 Weak transcription Brain Inferior Temporal Lobe brain
45 chr10:27291600-27331200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr10:27291600-27351000 Weak transcription NHLF lung
47 chr10:27291600-27388000 Weak transcription Small Intestine intestine
48 chr10:27291800-27325600 Weak transcription Primary B cells from cord blood blood
49 chr10:27292000-27362200 Weak transcription Fetal Brain Male brain
50 chr10:27292200-27311000 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015