The 2.0 version of rSNPBase

Variant report

Variant rs4749216
Chromosome Location chr10:27312163-27312164
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:27257600-27319000 Weak transcription Stomach Smooth Muscle stomach
2 chr10:27283200-27388400 Weak transcription Psoas Muscle Psoas
3 chr10:27285000-27319200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr10:27285400-27319200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr10:27286400-27316600 Weak transcription Duodenum Mucosa Duodenum
6 chr10:27287000-27350600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr10:27287800-27350600 Weak transcription Aorta Aorta
8 chr10:27288400-27329400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr10:27288800-27357000 Weak transcription Gastric stomach
10 chr10:27289200-27361200 Weak transcription Brain Cingulate Gyrus brain
11 chr10:27289600-27312400 Weak transcription Brain Substantia Nigra brain
12 chr10:27289600-27314200 Weak transcription Spleen Spleen
13 chr10:27289600-27318800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr10:27289600-27360800 Weak transcription Hela-S3 cervix
15 chr10:27289800-27360800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr10:27290200-27351400 Weak transcription Thymus Thymus
17 chr10:27290200-27361400 Weak transcription Placenta Placenta
18 chr10:27290600-27314800 Weak transcription Fetal Kidney kidney
19 chr10:27290800-27326800 Weak transcription Osteobl bone
20 chr10:27291000-27312200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr10:27291200-27316600 Weak transcription H1 Cell Line embryonic stem cell
22 chr10:27291200-27324000 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr10:27291400-27324000 Weak transcription Brain Germinal Matrix brain
24 chr10:27291400-27324200 Weak transcription Primary hematopoietic stem cells blood
25 chr10:27291400-27360600 Weak transcription Lung lung
26 chr10:27291600-27312600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr10:27291600-27314600 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr10:27291600-27316400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr10:27291600-27321200 Weak transcription Fetal Intestine Small intestine
30 chr10:27291600-27325200 Weak transcription Brain Inferior Temporal Lobe brain
31 chr10:27291600-27331200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr10:27291600-27351000 Weak transcription NHLF lung
33 chr10:27291600-27388000 Weak transcription Small Intestine intestine
34 chr10:27291800-27325600 Weak transcription Primary B cells from cord blood blood
35 chr10:27292000-27362200 Weak transcription Fetal Brain Male brain
36 chr10:27292200-27334800 Weak transcription Colon Smooth Muscle Colon
37 chr10:27292600-27312200 Weak transcription Brain Anterior Caudate brain
38 chr10:27292800-27315800 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr10:27293000-27312400 Weak transcription HUES48 Cell Line embryonic stem cell
40 chr10:27293600-27340200 Weak transcription A549 lung
41 chr10:27294400-27314800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr10:27295400-27319000 Weak transcription HepG2 liver
43 chr10:27295600-27319200 Weak transcription Ovary ovary
44 chr10:27295600-27328800 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr10:27295600-27345800 Weak transcription Brain Angular Gyrus brain
46 chr10:27296000-27316600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr10:27298800-27328800 Weak transcription Muscle Satellite Cultured Cells --
48 chr10:27302000-27319000 Weak transcription Fetal Brain Female brain
49 chr10:27303600-27361000 Weak transcription Rectal Smooth Muscle rectum
50 chr10:27304800-27329000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015