Variant report

Variant rs12374539
Chromosome Location chr5:145453934-145453935
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:145429600-145459600 Weak transcription Stomach Mucosa stomach
2 chr5:145442400-145461200 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr5:145443200-145458000 Weak transcription Liver Liver
4 chr5:145443600-145461000 Weak transcription Colonic Mucosa Colon
5 chr5:145447400-145455000 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr5:145447600-145455400 Weak transcription Fetal Intestine Large intestine
7 chr5:145448000-145460000 Weak transcription Fetal Intestine Small intestine
8 chr5:145448200-145455600 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr5:145448400-145458000 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr5:145448600-145455800 Weak transcription Duodenum Mucosa Duodenum
11 chr5:145449800-145454200 Enhancers Left Ventricle heart
12 chr5:145450000-145458600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr5:145450600-145461000 Weak transcription Right Atrium heart
14 chr5:145451000-145459800 Weak transcription Esophagus oesophagus
15 chr5:145451600-145458200 Weak transcription NHEK skin
16 chr5:145451800-145456800 Enhancers Fetal Heart heart
17 chr5:145451800-145459000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr5:145451800-145459000 Weak transcription HMEC breast
19 chr5:145451800-145460000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr5:145451800-145460600 Weak transcription Aorta Aorta
21 chr5:145452200-145459400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
22 chr5:145452400-145454000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
23 chr5:145453000-145454200 Enhancers H1 Cell Line embryonic stem cell
24 chr5:145453200-145455800 Weak transcription Brain Germinal Matrix brain
25 chr5:145453400-145454800 Weak transcription Fetal Brain Female brain
26 chr5:145453400-145455600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr5:145453400-145455600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr5:145453600-145454200 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
29 chr5:145453600-145454200 Enhancers H9 Cell Line embryonic stem cell
30 chr5:145453600-145454400 Bivalent Enhancer HUES64 Cell Line embryonic stem cell
31 chr5:145453600-145454600 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
32 chr5:145453600-145454800 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
33 chr5:145453600-145454800 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
34 chr5:145453600-145455400 Enhancers iPS-20b Cell Line embryonic stem cell
35 chr5:145453600-145455800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
36 chr5:145453600-145459200 Weak transcription Pancreas Pancrea
37 chr5:145453600-145461400 Weak transcription Right Ventricle heart
38 chr5:145453800-145454000 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
39 chr5:145453800-145454200 Bivalent Enhancer Fetal Lung lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links