Variant report

Variant	rs4913061
Chromosome Location	chr5:145451731-145451732
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:145446984..145448552-chr5:145450053..145451933,2	K562	blood:

Extended variants
information (count: 284 )
Associated
traits (count: 4 )

rSNPs within LD-proxies of this variant (count:283)

rs_ID	r²[population]
rs1006204	0.93[CHB][hapmap];0.94[JPT][hapmap];0.90[ASN][1000 genomes]
rs10491259	1.00[CEU][hapmap];0.94[JPT][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs10491260	1.00[CEU][hapmap];0.80[CHB][hapmap];0.94[JPT][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs10491261	1.00[CEU][hapmap];0.80[CHB][hapmap];0.94[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs10515564	1.00[CEU][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10515566	0.83[CEU][hapmap];0.80[CHB][hapmap];0.84[JPT][hapmap]
rs1054020	0.80[CHB][hapmap];0.94[JPT][hapmap]
rs10988	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11167931	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11167932	1.00[CEU][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11167933	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11167934	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11540214	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11540215	0.86[EUR][1000 genomes]
rs11540217	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11948016	0.80[EUR][1000 genomes]
rs11948180	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11948314	1.00[CEU][hapmap];0.80[CHB][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11949351	0.88[EUR][1000 genomes]
rs11949352	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11949703	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11951553	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11952228	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11952281	0.87[EUR][1000 genomes]
rs11952697	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11953506	0.83[CEU][hapmap];0.80[CHB][hapmap];0.84[JPT][hapmap]
rs11953517	1.00[CEU][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11953586	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11954083	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11954750	1.00[CEU][hapmap];0.94[JPT][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11954870	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11954923	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11954977	1.00[CEU][hapmap];0.80[CHB][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11955557	0.84[EUR][1000 genomes]
rs11955635	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11955695	0.90[EUR][1000 genomes]
rs11956508	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11957830	0.87[EUR][1000 genomes]
rs11957888	0.88[EUR][1000 genomes]
rs11957998	0.91[CEU][hapmap];0.80[CHB][hapmap];0.88[JPT][hapmap];0.80[EUR][1000 genomes]
rs11958136	0.85[JPT][hapmap]
rs11958216	0.82[EUR][1000 genomes]
rs11958630	0.90[EUR][1000 genomes]
rs11959805	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11960510	1.00[CEU][hapmap];0.93[CHB][hapmap];0.94[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12153109	1.00[CEU][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12153238	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12186358	0.80[CHB][hapmap];0.94[JPT][hapmap]
rs12186642	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12187128	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12187277	0.80[CHB][hapmap];0.85[JPT][hapmap]
rs12187649	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12187913	1.00[CEU][hapmap];0.94[JPT][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12188581	1.00[CEU][hapmap];0.94[JPT][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12188772	0.80[EUR][1000 genomes]
rs12188941	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12189385	1.00[CEU][hapmap];0.80[CHB][hapmap];0.94[JPT][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12374457	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12374516	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12374538	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12374539	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13153675	1.00[CEU][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13154547	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs13154735	0.85[EUR][1000 genomes]
rs13155119	0.82[CEU][hapmap];0.85[JPT][hapmap]
rs13157279	0.88[EUR][1000 genomes]
rs13159380	0.88[EUR][1000 genomes]
rs13161036	0.86[EUR][1000 genomes]
rs13161075	0.96[CEU][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13161659	1.00[CEU][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13162233	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13162640	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13164882	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13171596	0.86[EUR][1000 genomes]
rs13171828	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13171939	0.85[JPT][hapmap]
rs13172010	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13173462	0.90[JPT][hapmap]
rs13174055	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13175806	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13176784	0.88[EUR][1000 genomes]
rs13176915	0.88[EUR][1000 genomes]
rs13178370	1.00[CEU][hapmap];0.80[CHB][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13178516	1.00[CEU][hapmap];0.80[CHB][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13178755	0.86[EUR][1000 genomes]
rs13178840	1.00[CEU][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13179517	0.86[EUR][1000 genomes]
rs13180113	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13181074	0.95[CEU][hapmap];0.80[CHB][hapmap];0.94[JPT][hapmap];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs13181077	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs13182302	1.00[CEU][hapmap];0.80[CHB][hapmap];0.94[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs13182567	1.00[CEU][hapmap];0.80[CHB][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13182838	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs13183976	0.85[JPT][hapmap]
rs13184702	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13185805	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13186694	1.00[CEU][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13186701	0.86[EUR][1000 genomes]
rs1395276	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1395277	1.00[CEU][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1567057	0.85[JPT][hapmap]
rs17212373	1.00[CEU][hapmap];0.93[CHB][hapmap];0.94[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17212380	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17426845	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17427286	1.00[CEU][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17427691	1.00[CEU][hapmap];0.94[JPT][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17428100	1.00[CEU][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17428465	1.00[CEU][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17428570	1.00[CEU][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17428647	0.86[EUR][1000 genomes]
rs17428724	0.95[CEU][hapmap];0.94[JPT][hapmap];0.86[EUR][1000 genomes]
rs17429180	0.82[CEU][hapmap];0.80[CHB][hapmap];0.85[JPT][hapmap]
rs17492851	1.00[CEU][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17492893	1.00[CEU][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17492950	0.94[JPT][hapmap]
rs17493090	1.00[CEU][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17493851	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17500456	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17500483	0.94[JPT][hapmap]
rs17500504	1.00[CEU][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17500927	0.80[EUR][1000 genomes]
rs17501177	0.83[CEU][hapmap];0.80[CHB][hapmap];0.85[JPT][hapmap]
rs17796852	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17796858	1.00[CEU][hapmap];0.93[CHB][hapmap];0.94[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17796864	1.00[CEU][hapmap];0.93[CHB][hapmap];0.94[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17796870	1.00[CEU][hapmap];0.93[CHB][hapmap];0.94[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17796876	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1911112	1.00[CEU][hapmap];0.94[JPT][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1911113	1.00[CEU][hapmap];0.94[JPT][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1985600	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2015248	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2024055	1.00[CEU][hapmap];0.93[CHB][hapmap];0.94[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2024056	0.93[CHB][hapmap];0.94[JPT][hapmap];0.90[ASN][1000 genomes]
rs2024057	1.00[CEU][hapmap];0.93[CHB][hapmap];0.94[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2063002	0.91[CEU][hapmap];0.94[JPT][hapmap];0.80[EUR][1000 genomes]
rs2063005	0.88[JPT][hapmap]
rs2116749	0.80[CHB][hapmap];0.85[JPT][hapmap]
rs2240524	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2279895	0.91[CEU][hapmap];0.94[JPT][hapmap]
rs2292172	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2292173	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2302036	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2304032	0.83[CEU][hapmap];0.80[CHB][hapmap];0.85[JPT][hapmap]
rs2304033	0.81[CEU][hapmap];0.89[JPT][hapmap]
rs2400209	0.96[CEU][hapmap];0.93[JPT][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2400211	0.95[CEU][hapmap];0.94[JPT][hapmap];0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2895647	1.00[CEU][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2895648	1.00[CEU][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2895649	1.00[CEU][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2895650	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2939527	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2939536	1.00[CEU][hapmap];0.80[CHB][hapmap];0.94[JPT][hapmap];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2962502	0.84[CHB][hapmap];0.94[JPT][hapmap]
rs2962511	0.94[JPT][hapmap]
rs2962515	0.88[EUR][1000 genomes]
rs2963914	0.80[CHB][hapmap];0.94[JPT][hapmap]
rs2963915	0.94[JPT][hapmap]
rs2963919	0.94[JPT][hapmap]
rs2963921	0.94[JPT][hapmap]
rs2963924	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs33914983	0.88[EUR][1000 genomes]
rs34014355	0.88[EUR][1000 genomes]
rs34049009	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs34071526	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs34078408	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs34160255	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs34170515	1.00[CEU][hapmap];0.94[JPT][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs34272709	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs34342344	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs34345997	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs34404385	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs34405762	0.83[EUR][1000 genomes]
rs34461274	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs34482773	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs34516108	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs34529192	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs34530601	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs34581962	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs34601905	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs34672485	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34683303	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs34774165	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs34794113	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34794547	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs34818573	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs34818690	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs34848484	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35048686	0.88[EUR][1000 genomes]
rs35150639	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35185759	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs35228139	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35238125	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs35262581	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35283996	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35291206	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs35421100	0.88[EUR][1000 genomes]
rs35421875	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs35424128	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35436549	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35581472	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs35652702	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs35658996	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs35676277	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs35749752	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs35801832	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs35821418	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35825928	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs35868039	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs35869904	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs35917756	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs36059140	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs36095232	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs36098188	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs36102990	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs36122632	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3749994	1.00[CEU][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3763373	0.95[CEU][hapmap];0.83[JPT][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs3797626	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3797627	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3797628	1.00[CEU][hapmap];0.94[JPT][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3822623	1.00[CEU][hapmap];0.88[JPT][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3828935	0.95[CEU][hapmap];0.89[JPT][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs41338847	1.00[CEU][hapmap];0.94[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4413574	0.91[CEU][hapmap];0.80[CHB][hapmap];0.94[JPT][hapmap];0.86[EUR][1000 genomes]
rs4443471	0.88[EUR][1000 genomes]
rs4705119	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4705156	0.85[JPT][hapmap]
rs4705398	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4705438	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4913062	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4913063	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4913064	1.00[CEU][hapmap];0.80[CHB][hapmap];0.94[JPT][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4913067	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs55665974	0.81[EUR][1000 genomes]
rs55681213	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs55681251	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs55782203	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs55799797	0.85[EUR][1000 genomes]
rs55812375	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs55826688	0.81[AMR][1000 genomes]
rs55874924	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55909935	0.81[EUR][1000 genomes]
rs56278005	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs56338521	0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs56338615	0.88[EUR][1000 genomes]
rs56393319	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56410805	0.81[EUR][1000 genomes]
rs62373771	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62373773	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62373774	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62373785	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62373786	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62373789	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62373795	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs62373798	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62373799	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62373801	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62373802	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62373809	0.86[EUR][1000 genomes]
rs62373810	0.86[EUR][1000 genomes]
rs62373811	0.86[EUR][1000 genomes]
rs62373812	0.86[EUR][1000 genomes]
rs62373813	0.86[EUR][1000 genomes]
rs62373819	0.81[EUR][1000 genomes]
rs6580408	0.93[CHB][hapmap];0.94[JPT][hapmap];0.90[ASN][1000 genomes]
rs66538287	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs67051761	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs67598659	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs67829086	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs67986716	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs68022863	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6877277	1.00[CEU][hapmap];0.94[JPT][hapmap];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6878005	0.83[JPT][hapmap]
rs6881180	0.85[JPT][hapmap]
rs71594528	0.88[EUR][1000 genomes]
rs72820460	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72822286	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7443214	0.91[CEU][hapmap];0.94[JPT][hapmap];0.80[EUR][1000 genomes]
rs7722258	0.85[JPT][hapmap]
rs7725078	0.84[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7728381	0.94[JPT][hapmap]
rs7729098	0.85[JPT][hapmap]
rs9918101	0.94[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv883006	chr5:145450586-145672431	ZNF genes & repeats Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases

mRNA abundance (count:4)

SNP	Gene	Cis/trans	Tissue	Source
rs4913061	LARS	cis	Thyroid	GTEx
rs4913061	LARS	cis	Artery Tibial	GTEx
rs4913061	LARS	Cis_1M	lymphoblastoid	RTeQTL
rs4913061	LARS	cis	Nerve Tibial	GTEx

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:145412600-145453200	Weak transcription	Pancreas	Pancrea
2	chr5:145429600-145459600	Weak transcription	Stomach Mucosa	stomach
3	chr5:145442400-145461200	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr5:145443200-145458000	Weak transcription	Liver	Liver
5	chr5:145443600-145461000	Weak transcription	Colonic Mucosa	Colon
6	chr5:145447400-145455000	Weak transcription	Rectal Mucosa Donor 31	rectum
7	chr5:145447600-145455400	Weak transcription	Fetal Intestine Large	intestine
8	chr5:145447800-145452800	Weak transcription	Gastric	stomach
9	chr5:145447800-145453200	Weak transcription	Right Ventricle	heart
10	chr5:145448000-145460000	Weak transcription	Fetal Intestine Small	intestine
11	chr5:145448200-145455600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
12	chr5:145448400-145458000	Weak transcription	Rectal Mucosa Donor 29	rectum
13	chr5:145448600-145455800	Weak transcription	Duodenum Mucosa	Duodenum
14	chr5:145449800-145451800	Enhancers	GM12878-XiMat	blood
15	chr5:145449800-145454200	Enhancers	Left Ventricle	heart
16	chr5:145450000-145458600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr5:145450400-145451800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr5:145450400-145451800	Enhancers	Aorta	Aorta
19	chr5:145450400-145451800	Enhancers	HMEC	breast
20	chr5:145450600-145461000	Weak transcription	Right Atrium	heart
21	chr5:145450800-145451800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
22	chr5:145451000-145453400	Weak transcription	Psoas Muscle	Psoas
23	chr5:145451000-145459800	Weak transcription	Esophagus	oesophagus
24	chr5:145451200-145452000	Enhancers	HepG2	liver
25	chr5:145451400-145451800	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
26	chr5:145451400-145452000	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
27	chr5:145451600-145451800	Flanking Active TSS	Fetal Heart	heart
28	chr5:145451600-145452800	Enhancers	H9 Cell Line	embryonic stem cell
29	chr5:145451600-145458200	Weak transcription	NHEK	skin

The 2.0 version of rSNPBase

Variant report

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