Variant report

Variant rs35283996
Chromosome Location chr5:145451282-145451283
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:145412600-145453200 Weak transcription Pancreas Pancrea
2 chr5:145429600-145459600 Weak transcription Stomach Mucosa stomach
3 chr5:145442400-145461200 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr5:145443200-145458000 Weak transcription Liver Liver
5 chr5:145443600-145461000 Weak transcription Colonic Mucosa Colon
6 chr5:145447400-145455000 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr5:145447600-145455400 Weak transcription Fetal Intestine Large intestine
8 chr5:145447800-145452800 Weak transcription Gastric stomach
9 chr5:145447800-145453200 Weak transcription Right Ventricle heart
10 chr5:145448000-145460000 Weak transcription Fetal Intestine Small intestine
11 chr5:145448200-145455600 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr5:145448400-145458000 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr5:145448600-145455800 Weak transcription Duodenum Mucosa Duodenum
14 chr5:145449800-145451800 Enhancers GM12878-XiMat blood
15 chr5:145449800-145454200 Enhancers Left Ventricle heart
16 chr5:145450000-145451600 Weak transcription Small Intestine intestine
17 chr5:145450000-145458600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr5:145450200-145451600 Weak transcription H9 Cell Line embryonic stem cell
19 chr5:145450400-145451600 Enhancers Skeletal Muscle Female skeletal muscle
20 chr5:145450400-145451800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr5:145450400-145451800 Enhancers Aorta Aorta
22 chr5:145450400-145451800 Enhancers HMEC breast
23 chr5:145450600-145451600 Enhancers NHEK skin
24 chr5:145450600-145461000 Weak transcription Right Atrium heart
25 chr5:145450800-145451600 Enhancers Brain Anterior Caudate brain
26 chr5:145450800-145451800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr5:145451000-145453400 Weak transcription Psoas Muscle Psoas
28 chr5:145451000-145459800 Weak transcription Esophagus oesophagus
29 chr5:145451200-145451400 Flanking Active TSS Fetal Heart heart
30 chr5:145451200-145452000 Enhancers HepG2 liver

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