Variant report

Variant	rs12376278
Chromosome Location	chr9:72255620-72255621
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10867853	1.00[CHB][hapmap];0.81[EUR][1000 genomes]
rs10867859	1.00[CHB][hapmap];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11139605	1.00[ASW][hapmap];0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12005898	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4629937	1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[ASN][1000 genomes]
rs4744576	0.81[EUR][1000 genomes]
rs57202225	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs57337824	0.87[ASN][1000 genomes]
rs6559671	1.00[CHB][hapmap];1.00[CHD][hapmap];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs68150206	0.87[ASN][1000 genomes]
rs7020412	1.00[CHB][hapmap]
rs7033141	1.00[CHB][hapmap]
rs72719096	0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72719102	0.87[ASN][1000 genomes]
rs7851932	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7860931	1.00[CHB][hapmap]
rs7868291	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[YRI][hapmap];0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:72240400-72260200	Weak transcription	Brain Anterior Caudate	brain
2	chr9:72242200-72260200	Weak transcription	Fetal Lung	lung
3	chr9:72247400-72264200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr9:72250200-72261400	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr9:72252800-72257600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr9:72253000-72260000	Weak transcription	Brain Inferior Temporal Lobe	brain
7	chr9:72253000-72285000	Weak transcription	Fetal Brain Female	brain
8	chr9:72253200-72260000	Weak transcription	Brain Substantia Nigra	brain
9	chr9:72253200-72260200	Weak transcription	HMEC	breast
10	chr9:72253200-72264800	Weak transcription	NH-A	brain
11	chr9:72253400-72274400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr9:72253600-72257600	Weak transcription	Liver	Liver
13	chr9:72253600-72264200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr9:72254000-72260400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr9:72254400-72260200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr9:72255400-72264400	Weak transcription	Left Ventricle	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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