The 2.0 version of rSNPBase

Variant report

Variant rs12377604
Chromosome Location chr9:100697287-100697288
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100693400-100700400 Enhancers Primary T helper naive cells fromperipheralblood blood
2 chr9:100694400-100697600 Weak transcription Dnd41 blood
3 chr9:100694400-100699200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr9:100694600-100700000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr9:100695200-100699600 Transcr. at gene 5' and 3' K562 blood
6 chr9:100695400-100699000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr9:100695600-100700000 Enhancers Primary T helper naive cells from peripheral blood blood
8 chr9:100695800-100698800 Enhancers Fetal Thymus thymus
9 chr9:100696000-100697800 Enhancers Primary T cells fromperipheralblood blood
10 chr9:100696000-100700000 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr9:100696200-100697400 Weak transcription Primary T helper cells fromperipheralblood blood
12 chr9:100696600-100698000 Enhancers Primary T cells from cord blood blood
13 chr9:100696600-100698800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
14 chr9:100696800-100697600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr9:100696800-100697800 Bivalent Enhancer Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr9:100696800-100697800 Enhancers Brain Hippocampus Middle brain
17 chr9:100696800-100698000 Enhancers Primary T killer naive cells fromperipheralblood blood
18 chr9:100696800-100698600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
19 chr9:100697000-100697800 Enhancers Brain Inferior Temporal Lobe brain
20 chr9:100697000-100698000 Enhancers Brain Cingulate Gyrus brain
21 chr9:100697000-100698000 Enhancers Thymus Thymus
22 chr9:100697000-100700200 Enhancers Primary T killer memory cells from peripheral blood blood
23 chr9:100697200-100697400 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr9:100697200-100698000 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr9:100697200-100698400 Transcr. at gene 5' and 3' Primary hematopoietic stem cells blood
26 chr9:100697200-100701600 Enhancers Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015