Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:110368698..110370963-chr13:110374114..110375940,2	K562	blood:
2	chr13:110373412..110375608-chr13:110378035..110379687,2	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11069795	0.90[EUR][1000 genomes]
rs11069796	0.91[EUR][1000 genomes]
rs11069798	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11069799	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11069802	0.90[ASN][1000 genomes]
rs11617494	0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs11617495	0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs11618612	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12427884	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12428361	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12429168	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1330542	0.88[EUR][1000 genomes]
rs1411551	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1888247	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs55832977	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56256197	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs60375720	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61964786	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61964792	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7322690	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1044855	chr13:110301572-110408608	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:110368600-110377600	Weak transcription	Primary neutrophils fromperipheralblood	blood
2	chr13:110369200-110376800	Weak transcription	Adipose Nuclei	Adipose
3	chr13:110372600-110377800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr13:110373000-110382000	Enhancers	Liver	Liver
5	chr13:110373200-110377200	Weak transcription	Primary hematopoietic stem cells	blood
6	chr13:110373200-110381200	Weak transcription	Brain Cingulate Gyrus	brain
7	chr13:110373400-110377600	Weak transcription	Brain Hippocampus Middle	brain
8	chr13:110373600-110374400	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr13:110373600-110377200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr13:110373600-110377200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr13:110373600-110377200	Weak transcription	Brain Anterior Caudate	brain
12	chr13:110373600-110377400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
13	chr13:110373600-110377800	Weak transcription	Brain Substantia Nigra	brain
14	chr13:110373600-110377800	Weak transcription	Stomach Mucosa	stomach
15	chr13:110373600-110381200	Weak transcription	Brain Angular Gyrus	brain
16	chr13:110373600-110381200	Weak transcription	Brain Inferior Temporal Lobe	brain
17	chr13:110374200-110375400	Weak transcription	Pancreatic Islets	Pancreatic Islet
18	chr13:110374200-110376800	Weak transcription	Brain Germinal Matrix	brain
19	chr13:110374200-110377400	Genic enhancers	Dnd41	blood

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