Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:110372207..110373827-chr13:110434766..110436789,2	K562	blood:
2	chr13:110372327..110374107-chr13:110434766..110436742,2	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11069795	0.90[EUR][1000 genomes]
rs11069796	0.91[EUR][1000 genomes]
rs11069798	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11069799	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11069802	0.90[ASN][1000 genomes]
rs11617494	0.90[ASN][1000 genomes]
rs11617495	0.90[ASN][1000 genomes]
rs11618612	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12427884	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12428305	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12428361	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12429168	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1330542	0.88[EUR][1000 genomes]
rs1411551	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1888247	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs55832977	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56256197	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs60375720	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61964786	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7322690	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1044855	chr13:110301572-110408608	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:110368600-110377600	Weak transcription	Primary neutrophils fromperipheralblood	blood
2	chr13:110369200-110376800	Weak transcription	Adipose Nuclei	Adipose
3	chr13:110370200-110374000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr13:110371400-110373600	Enhancers	Brain Substantia Nigra	brain
5	chr13:110371800-110373600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr13:110371800-110373600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr13:110372000-110373600	Enhancers	Primary hematopoietic stem cells short term culture	blood
8	chr13:110372000-110373600	Enhancers	Brain Anterior Caudate	brain
9	chr13:110372200-110373600	Enhancers	Brain Inferior Temporal Lobe	brain
10	chr13:110372200-110374200	Enhancers	Brain Germinal Matrix	brain
11	chr13:110372200-110374200	Enhancers	HepG2	liver
12	chr13:110372400-110373600	Enhancers	Stomach Mucosa	stomach
13	chr13:110372600-110377800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
14	chr13:110372800-110374200	Enhancers	Dnd41	blood
15	chr13:110373000-110373600	Enhancers	Brain Angular Gyrus	brain
16	chr13:110373000-110373600	Enhancers	Fetal Lung	lung
17	chr13:110373000-110382000	Enhancers	Liver	Liver
18	chr13:110373200-110374200	Enhancers	Pancreatic Islets	Pancreatic Islet
19	chr13:110373200-110377200	Weak transcription	Primary hematopoietic stem cells	blood
20	chr13:110373200-110381200	Weak transcription	Brain Cingulate Gyrus	brain
21	chr13:110373400-110377600	Weak transcription	Brain Hippocampus Middle	brain

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