Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:110357646..110363489-chr13:110367118..110372091,7	K562	blood:
2	chr13:110355348..110357050-chr13:110370423..110373303,2	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11069795	0.90[EUR][1000 genomes]
rs11069796	0.91[EUR][1000 genomes]
rs11069798	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11069799	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11069802	0.90[ASN][1000 genomes]
rs11617494	0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs11617495	0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs11618612	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12427884	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12428305	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12428361	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12429168	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1330542	0.88[EUR][1000 genomes]
rs1411551	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1888247	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs56256197	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs60375720	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61964786	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61964792	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7322690	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1044855	chr13:110301572-110408608	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:110367400-110372200	Weak transcription	Ovary	ovary
2	chr13:110368600-110377600	Weak transcription	Primary neutrophils fromperipheralblood	blood
3	chr13:110369200-110376800	Weak transcription	Adipose Nuclei	Adipose
4	chr13:110369400-110372400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr13:110370000-110372600	Enhancers	Liver	Liver
6	chr13:110370200-110374000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr13:110371200-110373000	Enhancers	A549	lung
8	chr13:110371400-110372400	Weak transcription	Brain Hippocampus Middle	brain
9	chr13:110371400-110373600	Enhancers	Brain Substantia Nigra	brain
10	chr13:110371800-110372200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr13:110371800-110373600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr13:110371800-110373600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr13:110372000-110372200	Enhancers	Brain Angular Gyrus	brain
14	chr13:110372000-110372400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
15	chr13:110372000-110372600	Enhancers	Fetal Lung	lung
16	chr13:110372000-110372800	Genic enhancers	Dnd41	blood
17	chr13:110372000-110373200	Enhancers	Primary hematopoietic stem cells	blood
18	chr13:110372000-110373400	Enhancers	K562	blood
19	chr13:110372000-110373600	Enhancers	Primary hematopoietic stem cells short term culture	blood
20	chr13:110372000-110373600	Enhancers	Brain Anterior Caudate	brain

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