Variant report

Variant rs12467259
Chromosome Location chr2:74120424-74120425
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:74115000-74123600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr2:74117200-74121400 Weak transcription Gastric stomach
3 chr2:74118200-74123400 Weak transcription Brain Hippocampus Middle brain
4 chr2:74118200-74123600 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr2:74118600-74128400 Weak transcription HMEC breast
6 chr2:74119400-74124600 Active TSS Duodenum Smooth Muscle Duodenum
7 chr2:74119600-74120600 Enhancers Fetal Muscle Trunk muscle
8 chr2:74119600-74120800 Flanking Active TSS NHLF lung
9 chr2:74119600-74122800 Active TSS Aorta Aorta
10 chr2:74119800-74120800 Active TSS Rectal Smooth Muscle rectum
11 chr2:74119800-74124800 Active TSS Rectal Mucosa Donor 29 rectum
12 chr2:74120000-74120600 Flanking Active TSS HUES6 Cell Line embryonic stem cell
13 chr2:74120000-74121400 Active TSS Breast Myoepithelial Primary Cells Breast
14 chr2:74120000-74122400 Bivalent/Poised TSS NH-A brain
15 chr2:74120200-74120600 Flanking Active TSS Ovary ovary
16 chr2:74120200-74120600 Active TSS Skeletal Muscle Female skeletal muscle
17 chr2:74120200-74121000 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr2:74120200-74121200 Active TSS Rectal Mucosa Donor 31 rectum
19 chr2:74120200-74122200 Active TSS Duodenum Mucosa Duodenum
20 chr2:74120200-74122400 Active TSS Colonic Mucosa Colon
21 chr2:74120200-74122400 Active TSS Esophagus oesophagus
22 chr2:74120200-74122400 Transcr. at gene 5' and 3' Fetal Stomach stomach
23 chr2:74120200-74123000 Weak transcription Fetal Thymus thymus
24 chr2:74120200-74123200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr2:74120200-74127600 Active TSS Fetal Intestine Small intestine
26 chr2:74120200-74130200 Active TSS Fetal Intestine Large intestine
27 chr2:74120400-74120600 Flanking Active TSS HUES48 Cell Line embryonic stem cell
28 chr2:74120400-74120600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
29 chr2:74120400-74120800 Active TSS Lung lung
30 chr2:74120400-74121000 Active TSS ES-WA7 Cell Line embryonic stem cell
31 chr2:74120400-74123600 Weak transcription Fetal Muscle Leg muscle
32 chr2:74120400-74123800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr2:74120400-74124200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr2:74120400-74124400 Weak transcription Stomach Mucosa stomach
35 chr2:74120400-74128800 Transcr. at gene 5' and 3' Colon Smooth Muscle Colon
36 chr2:74120400-74130000 Transcr. at gene 5' and 3' Stomach Smooth Muscle stomach

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