Variant report

No.	Distal block	Cell Line	Cell type
1	chr8:124560690..124563548-chr8:124570641..124572984,3	MCF-7	breast:
2	chr8:124570137..124572022-chr8:124691022..124692665,2	MCF-7	breast:
3	chr8:124558984..124560715-chr8:124570075..124571667,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10505433	0.83[EUR][1000 genomes]
rs12545624	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12549584	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs16898561	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs16898563	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs16898583	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16898590	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs16898594	0.89[EUR][1000 genomes]
rs16898607	0.89[EUR][1000 genomes]
rs16898612	0.89[EUR][1000 genomes]
rs16898613	0.89[EUR][1000 genomes]
rs16898624	0.89[EUR][1000 genomes]
rs56804846	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58536265	0.88[EUR][1000 genomes]
rs59498777	0.88[EUR][1000 genomes]
rs59621056	0.88[EUR][1000 genomes]
rs60114686	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7006769	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7018353	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73335873	0.88[EUR][1000 genomes]
rs9642866	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831450	chr8:124471741-124661359	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:124571000-124575400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr8:124571400-124572800	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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