Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:124581523..124583761-chr8:124647181..124648699,2	MCF-7	breast:
2	chr8:124574833..124579835-chr8:124581420..124586695,7	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FBXO32-2	chr8:124579311-124582785	ucscGeneNc_uc003yqp_1

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10505433	0.83[EUR][1000 genomes]
rs12541091	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12545624	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12549584	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs16898561	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs16898563	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16898583	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16898590	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs16898594	0.89[EUR][1000 genomes]
rs16898607	0.89[EUR][1000 genomes]
rs16898612	0.89[EUR][1000 genomes]
rs16898613	0.89[EUR][1000 genomes]
rs16898624	0.89[EUR][1000 genomes]
rs56804846	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58536265	0.88[EUR][1000 genomes]
rs59498777	0.88[EUR][1000 genomes]
rs59621056	0.88[EUR][1000 genomes]
rs7006769	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7018353	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73335873	0.88[EUR][1000 genomes]
rs9642866	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831450	chr8:124471741-124661359	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:124575600-124598600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:124578800-124582800	Enhancers	Breast Myoepithelial Primary Cells	Breast
3	chr8:124580600-124581600	Enhancers	Fetal Kidney	kidney
4	chr8:124580600-124582000	Enhancers	Fetal Muscle Leg	muscle
5	chr8:124580600-124582400	Enhancers	Psoas Muscle	Psoas
6	chr8:124580800-124581600	Enhancers	Fetal Heart	heart
7	chr8:124580800-124581600	Enhancers	HUVEC	blood vessel
8	chr8:124581400-124582600	Weak transcription	Skeletal Muscle Female	skeletal muscle
9	chr8:124581400-124583200	Weak transcription	Right Atrium	heart
10	chr8:124581400-124583200	Weak transcription	HSMMtube	muscle
11	chr8:124581400-124584600	Weak transcription	Placenta	Placenta
12	chr8:124581400-124584800	Weak transcription	Esophagus	oesophagus
13	chr8:124581400-124585000	Weak transcription	Adipose Nuclei	Adipose

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