Variant report

Variant	rs12675191
Chromosome Location	chr8:59820261-59820262
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs1015794	0.90[CEU][hapmap];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12543935	0.83[CEU][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs13262230	0.87[ASN][1000 genomes]
rs13280926	0.84[ASN][1000 genomes]
rs1349113	0.87[ASN][1000 genomes]
rs1375191	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1375192	0.85[CEU][hapmap];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1375193	0.90[CEU][hapmap];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1448547	0.85[CEU][hapmap];0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1448549	0.90[CEU][hapmap];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17299611	0.86[CEU][hapmap];0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1900773	0.86[CEU][hapmap];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1900774	0.86[CEU][hapmap];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2044643	0.87[ASN][1000 genomes]
rs2197803	0.85[CEU][hapmap];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2326268	0.94[CEU][hapmap];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3780001	0.81[CEU][hapmap];0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4527857	0.86[CEU][hapmap];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4527858	0.86[CEU][hapmap];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4737526	0.95[CEU][hapmap];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4737527	0.95[CEU][hapmap];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4738736	0.86[CEU][hapmap];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55746401	0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs56024919	0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs56073120	0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs58180923	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6415583	0.87[ASN][1000 genomes]
rs66954327	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6983623	0.85[CEU][hapmap];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6983967	0.85[CEU][hapmap];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6988253	0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7001367	0.84[ASN][1000 genomes]
rs7001614	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7002226	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7012303	0.85[CEU][hapmap];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs72651323	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72651324	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72651329	0.82[EUR][1000 genomes]
rs7813733	0.90[CEU][hapmap];0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7826756	0.86[CEU][hapmap];0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7827417	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7834158	0.90[CEU][hapmap];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7845800	0.87[ASN][1000 genomes]

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59802800-59826600	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr8:59805400-59826800	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr8:59809000-59826400	Weak transcription	Thymus	Thymus
4	chr8:59811400-59851400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
5	chr8:59811600-59849000	Weak transcription	Primary T cells fromperipheralblood	blood
6	chr8:59811800-59848800	Weak transcription	Primary hematopoietic stem cells	blood
7	chr8:59812000-59823200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr8:59815000-59820800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr8:59816000-59823600	Weak transcription	Stomach Smooth Muscle	stomach
10	chr8:59816000-59825800	Weak transcription	Fetal Kidney	kidney
11	chr8:59816000-59840000	Weak transcription	Rectal Mucosa Donor 31	rectum
12	chr8:59816200-59823400	Weak transcription	Osteobl	bone
13	chr8:59816200-59839800	Weak transcription	Fetal Stomach	stomach
14	chr8:59816400-59823600	Weak transcription	Colon Smooth Muscle	Colon
15	chr8:59816400-59840200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
16	chr8:59817000-59847000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
17	chr8:59817400-59821400	Strong transcription	Dnd41	blood
18	chr8:59817400-59822800	Weak transcription	Cortex derived primary cultured neurospheres	brain
19	chr8:59817800-59867800	Weak transcription	Sigmoid Colon	Sigmoid Colon
20	chr8:59818400-59820400	Weak transcription	Primary T cells from cord blood	blood
21	chr8:59818800-59826400	Weak transcription	Pancreatic Islets	Pancreatic Islet
22	chr8:59819600-59823200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr8:59819800-59823200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr8:59820200-59821000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
25	chr8:59820200-59821600	Weak transcription	Gastric	stomach
26	chr8:59820200-59821800	Strong transcription	Fetal Thymus	thymus

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