Variant report

Variant	rs4737527
Chromosome Location	chr8:59823491-59823492
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 49 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:49)

rs_ID	r²[population]
rs1015794	0.95[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10504269	0.87[CHB][hapmap]
rs12115074	0.81[CHD][hapmap]
rs12543935	0.89[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12675191	0.95[CEU][hapmap];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13262230	0.83[ASN][1000 genomes]
rs13280926	0.91[CHB][hapmap];0.80[ASN][1000 genomes]
rs1349113	0.83[ASN][1000 genomes]
rs1375191	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1375192	0.90[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.93[GIH][hapmap];0.88[JPT][hapmap];0.95[MEX][hapmap];0.89[TSI][hapmap];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1375193	0.82[ASW][hapmap];0.95[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.88[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.89[TSI][hapmap];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1448547	0.90[CEU][hapmap];0.91[CHB][hapmap];0.91[CHD][hapmap];0.91[GIH][hapmap];0.88[JPT][hapmap];0.90[MEX][hapmap];0.86[TSI][hapmap];0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1448549	0.95[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17233005	0.83[CHB][hapmap]
rs17299611	0.90[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1900773	0.90[CEU][hapmap];0.83[CHB][hapmap];0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1900774	0.90[CEU][hapmap];0.95[CHB][hapmap];0.88[JPT][hapmap];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2044643	0.86[CHB][hapmap];0.84[CHD][hapmap];0.83[JPT][hapmap];0.84[ASN][1000 genomes]
rs2197803	0.90[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.91[GIH][hapmap];0.88[JPT][hapmap];0.90[MEX][hapmap];0.89[TSI][hapmap];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2326268	0.94[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3780001	0.82[ASW][hapmap];0.86[CEU][hapmap];0.86[CHB][hapmap];0.95[CHD][hapmap];0.89[GIH][hapmap];0.82[JPT][hapmap];1.00[LWK][hapmap];0.94[MEX][hapmap];1.00[MKK][hapmap];0.89[TSI][hapmap];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4527857	0.90[CEU][hapmap];0.95[CHB][hapmap];0.88[JPT][hapmap];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4527858	0.90[CEU][hapmap];0.95[CHB][hapmap];0.88[JPT][hapmap];0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4737526	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4738736	0.90[CEU][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4738743	0.82[JPT][hapmap]
rs55746401	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs56024919	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs56073120	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs58180923	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6415583	0.86[CHB][hapmap];0.84[JPT][hapmap];0.83[ASN][1000 genomes]
rs66954327	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6983623	0.90[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.91[GIH][hapmap];0.88[JPT][hapmap];0.94[MEX][hapmap];0.89[TSI][hapmap];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6983967	0.90[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.91[GIH][hapmap];0.88[JPT][hapmap];0.90[MEX][hapmap];0.88[TSI][hapmap];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6988253	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7001367	0.91[CHB][hapmap];0.80[ASN][1000 genomes]
rs7001614	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7002226	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7012303	0.90[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.91[GIH][hapmap];0.88[JPT][hapmap];0.90[MEX][hapmap];0.89[TSI][hapmap];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72651323	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72651324	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72651329	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7812381	0.86[CHB][hapmap];0.82[JPT][hapmap]
rs7813733	0.95[CEU][hapmap];0.95[CHB][hapmap];0.88[JPT][hapmap];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7826756	0.90[CEU][hapmap];0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7827417	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7834158	0.95[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7842858	0.82[ASW][hapmap];0.88[CHD][hapmap];0.90[MEX][hapmap];1.00[MKK][hapmap]
rs7845800	0.86[CHB][hapmap];0.86[CHD][hapmap];0.84[JPT][hapmap];0.83[ASN][1000 genomes]

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59802800-59826600	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr8:59805400-59826800	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr8:59809000-59826400	Weak transcription	Thymus	Thymus
4	chr8:59811400-59851400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
5	chr8:59811600-59849000	Weak transcription	Primary T cells fromperipheralblood	blood
6	chr8:59811800-59848800	Weak transcription	Primary hematopoietic stem cells	blood
7	chr8:59816000-59823600	Weak transcription	Stomach Smooth Muscle	stomach
8	chr8:59816000-59825800	Weak transcription	Fetal Kidney	kidney
9	chr8:59816000-59840000	Weak transcription	Rectal Mucosa Donor 31	rectum
10	chr8:59816200-59839800	Weak transcription	Fetal Stomach	stomach
11	chr8:59816400-59823600	Weak transcription	Colon Smooth Muscle	Colon
12	chr8:59816400-59840200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr8:59817000-59847000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
14	chr8:59817800-59867800	Weak transcription	Sigmoid Colon	Sigmoid Colon
15	chr8:59818800-59826400	Weak transcription	Pancreatic Islets	Pancreatic Islet
16	chr8:59821000-59838400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
17	chr8:59821200-59835200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr8:59821400-59833400	Weak transcription	Dnd41	blood
19	chr8:59821800-59824200	Weak transcription	Fetal Thymus	thymus
20	chr8:59821800-59835200	Weak transcription	Primary T cells from cord blood	blood
21	chr8:59822800-59825200	Enhancers	Cortex derived primary cultured neurospheres	brain
22	chr8:59823200-59824000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr8:59823200-59824000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr8:59823200-59824000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr8:59823200-59824000	Enhancers	Adipose Nuclei	Adipose
26	chr8:59823400-59823800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
27	chr8:59823400-59824000	Enhancers	Muscle Satellite Cultured Cells	--
28	chr8:59823400-59824000	Enhancers	NHDF-Ad	bronchial
29	chr8:59823400-59824200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr8:59823400-59824200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr8:59823400-59824200	Enhancers	Osteobl	bone

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