The 2.0 version of rSNPBase

Variant report

Variant rs58180923
Chromosome Location chr8:59862176-59862177
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:59817800-59867800 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr8:59843800-59863600 Weak transcription H9 Cell Line embryonic stem cell
3 chr8:59851400-59878600 Weak transcription Aorta Aorta
4 chr8:59852000-59862600 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr8:59852000-59871200 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr8:59852000-59875200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr8:59852000-59883400 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr8:59852200-59866800 Weak transcription Duodenum Mucosa Duodenum
9 chr8:59852200-59866800 Weak transcription Thymus Thymus
10 chr8:59852200-59871800 Weak transcription Stomach Smooth Muscle stomach
11 chr8:59852200-59874200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr8:59852400-59875000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr8:59852400-59875600 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr8:59852600-59888600 Weak transcription Primary hematopoietic stem cells blood
15 chr8:59857600-59865800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr8:59858200-59863200 Weak transcription Primary T cells from cord blood blood
17 chr8:59858200-59866800 Weak transcription Dnd41 blood
18 chr8:59858200-59870400 Weak transcription Brain Germinal Matrix brain
19 chr8:59858200-59872600 Weak transcription Fetal Kidney kidney
20 chr8:59859000-59865000 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr8:59859200-59865400 Weak transcription Fetal Lung lung
22 chr8:59859200-59866600 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr8:59859200-59867000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr8:59859200-59870800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr8:59859400-59865400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr8:59859400-59866000 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr8:59860400-59865800 Weak transcription Osteobl bone
28 chr8:59860400-59866600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr8:59860400-59871200 Weak transcription Rectal Smooth Muscle rectum
30 chr8:59860600-59865200 Weak transcription NHDF-Ad bronchial
31 chr8:59860800-59865400 Weak transcription Small Intestine intestine
32 chr8:59860800-59866000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr8:59860800-59866000 Weak transcription Colon Smooth Muscle Colon
34 chr8:59860800-59866800 Weak transcription Fetal Thymus thymus
35 chr8:59861000-59862200 Enhancers iPS-15b Cell Line embryonic stem cell
36 chr8:59861000-59864000 Weak transcription GM12878-XiMat blood
37 chr8:59861200-59862200 Enhancers HUES48 Cell Line embryonic stem cell
38 chr8:59861200-59870800 Weak transcription Fetal Stomach stomach
39 chr8:59861800-59863600 Weak transcription iPS-20b Cell Line embryonic stem cell
40 chr8:59861800-59864000 Weak transcription HUES64 Cell Line embryonic stem cell
41 chr8:59862000-59864000 Weak transcription iPS-18 Cell Line embryonic stem cell

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Last update: Aug 31, 2015