The 2.0 version of rSNPBase

Variant report

Variant rs12685903
Chromosome Location chr9:98066049-98066050
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:98050200-98067400 Weak transcription A549 lung
2 chr9:98055000-98068600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr9:98059600-98067000 Weak transcription GM12878-XiMat blood
4 chr9:98059800-98068000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr9:98059800-98068600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr9:98060200-98067400 Weak transcription HSMM muscle
7 chr9:98060400-98075000 Weak transcription NHEK skin
8 chr9:98061000-98067200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr9:98061000-98068800 Weak transcription Small Intestine intestine
10 chr9:98061800-98067400 Weak transcription Fetal Lung lung
11 chr9:98063200-98068200 Weak transcription Primary T regulatory cells fromperipheralblood blood
12 chr9:98063400-98068200 Weak transcription Osteobl bone
13 chr9:98063400-98069800 Weak transcription Fetal Kidney kidney
14 chr9:98063600-98067800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr9:98063600-98068200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr9:98063800-98066600 Enhancers Primary T helper naive cells fromperipheralblood blood
17 chr9:98063800-98066600 Enhancers Primary T killer naive cells fromperipheralblood blood
18 chr9:98063800-98067400 Enhancers Primary T helper cells PMA-I stimulated --
19 chr9:98064000-98067400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr9:98064000-98068600 Weak transcription Ovary ovary
21 chr9:98064400-98066200 Enhancers Fetal Thymus thymus
22 chr9:98064400-98066400 Enhancers Primary T cells from cord blood blood
23 chr9:98064600-98066800 Enhancers Primary T helper cells fromperipheralblood blood
24 chr9:98064800-98068600 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr9:98065000-98066200 Weak transcription Fetal Stomach stomach
26 chr9:98065000-98066200 Enhancers Spleen Spleen
27 chr9:98065200-98066400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr9:98065200-98067200 Weak transcription NHLF lung
29 chr9:98065400-98067400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr9:98065600-98066800 Enhancers Thymus Thymus
31 chr9:98065800-98066200 Enhancers Left Ventricle heart
32 chr9:98065800-98066400 Enhancers Lung lung
33 chr9:98065800-98066600 Enhancers Primary T helper naive cells from peripheral blood blood
34 chr9:98065800-98067000 Enhancers Primary T cells fromperipheralblood blood
35 chr9:98066000-98066200 Enhancers Fetal Muscle Leg muscle
36 chr9:98066000-98066600 Enhancers Primary T killer memory cells from peripheral blood blood
37 chr9:98066000-98068600 Weak transcription Psoas Muscle Psoas
38 chr9:98066000-98069000 Enhancers HUVEC blood vessel

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Last update: Aug 31, 2015