The 2.0 version of rSNPBase

Variant report

Variant rs4647486
Chromosome Location chr9:97946993-97946994
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:97906600-97950200 Weak transcription Primary hematopoietic stem cells short term culture blood
2 chr9:97920000-97952000 Weak transcription Aorta Aorta
3 chr9:97920000-97952000 Weak transcription Esophagus oesophagus
4 chr9:97920400-97951800 Weak transcription HepG2 liver
5 chr9:97927600-97950400 Weak transcription Primary hematopoietic stem cells blood
6 chr9:97930600-97950400 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr9:97930600-97950800 Weak transcription Thymus Thymus
8 chr9:97930600-97952000 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr9:97930800-97951600 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr9:97930800-97952400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr9:97933200-97950600 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr9:97939600-97950200 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr9:97940200-97950200 Weak transcription Fetal Lung lung
14 chr9:97940600-97950600 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr9:97940800-97950400 Weak transcription Fetal Muscle Leg muscle
16 chr9:97941000-97952200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr9:97941000-97959800 Weak transcription Pancreas Pancrea
18 chr9:97941800-97950400 Weak transcription Gastric stomach
19 chr9:97944400-97950600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr9:97945000-97947000 Enhancers iPS-18 Cell Line embryonic stem cell
21 chr9:97945400-97948400 Weak transcription Lung lung
22 chr9:97945600-97948400 Weak transcription Duodenum Mucosa Duodenum
23 chr9:97945600-97952400 Weak transcription Fetal Muscle Trunk muscle
24 chr9:97945800-97948400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr9:97945800-97948400 Weak transcription Fetal Stomach stomach
26 chr9:97945800-97950200 Weak transcription Ovary ovary
27 chr9:97945800-97950400 Weak transcription Fetal Kidney kidney
28 chr9:97945800-97950400 Weak transcription Right Ventricle heart
29 chr9:97945800-97950600 Weak transcription Primary T cells from cord blood blood
30 chr9:97945800-97950600 Weak transcription Fetal Intestine Small intestine
31 chr9:97945800-97951600 Weak transcription GM12878-XiMat blood
32 chr9:97945800-97952800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr9:97946000-97948200 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr9:97946000-97950200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr9:97946000-97950400 Weak transcription Left Ventricle heart
36 chr9:97946000-97950600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr9:97946000-97951600 Weak transcription Rectal Smooth Muscle rectum
38 chr9:97946000-97952000 Weak transcription Fetal Intestine Large intestine
39 chr9:97946000-97952200 Weak transcription Fetal Heart heart
40 chr9:97946200-97948200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr9:97946200-97950400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr9:97946200-97950600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr9:97946200-97950800 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr9:97946200-97950800 Weak transcription H9 Cell Line embryonic stem cell
45 chr9:97946200-97952000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
46 chr9:97946200-97955600 Weak transcription iPS-15b Cell Line embryonic stem cell
47 chr9:97946200-97955800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr9:97946400-97950400 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr9:97946400-97952000 Weak transcription Primary T cells fromperipheralblood blood
50 chr9:97946800-97950400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015