The 2.0 version of rSNPBase

Variant report

Variant rs73530498
Chromosome Location chr9:97910204-97910205
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:97887400-97916400 Weak transcription Thymus Thymus
2 chr9:97890000-97919600 Weak transcription Hela-S3 cervix
3 chr9:97890000-97928000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr9:97893800-97912600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr9:97893800-97918800 Weak transcription Gastric stomach
6 chr9:97893800-97940400 Weak transcription Pancreas Pancrea
7 chr9:97894200-97925600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr9:97896400-97918400 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr9:97896400-97920000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr9:97897200-97917400 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr9:97897200-97919400 Weak transcription GM12878-XiMat blood
12 chr9:97897200-97920400 Weak transcription Duodenum Mucosa Duodenum
13 chr9:97897600-97915400 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr9:97900600-97919600 Weak transcription Rectal Smooth Muscle rectum
15 chr9:97900800-97910600 Weak transcription Lung lung
16 chr9:97900800-97930800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr9:97901000-97919600 Weak transcription Psoas Muscle Psoas
18 chr9:97901200-97911200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr9:97901200-97919800 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr9:97901600-97925000 Weak transcription Fetal Intestine Large intestine
21 chr9:97901800-97912200 Weak transcription Primary T cells from cord blood blood
22 chr9:97902000-97929800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr9:97905200-97911000 Weak transcription NHEK skin
24 chr9:97905400-97915800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr9:97905800-97924000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr9:97906400-97933000 Weak transcription Fetal Kidney kidney
27 chr9:97906600-97918600 Weak transcription Stomach Smooth Muscle stomach
28 chr9:97906600-97950200 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr9:97907200-97913400 Weak transcription Fetal Intestine Small intestine
30 chr9:97907200-97919800 Weak transcription Fetal Muscle Leg muscle
31 chr9:97907200-97920000 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr9:97909400-97910800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr9:97909800-97910400 Enhancers Fetal Heart heart
34 chr9:97909800-97910400 Enhancers A549 lung
35 chr9:97909800-97910400 Enhancers HepG2 liver
36 chr9:97909800-97910800 Flanking Active TSS Liver Liver
37 chr9:97909800-97911000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr9:97909800-97911200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr9:97909800-97911400 Enhancers Brain Hippocampus Middle brain
40 chr9:97910000-97910400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr9:97910000-97910400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
42 chr9:97910000-97910400 Enhancers Fetal Stomach stomach
43 chr9:97910000-97910600 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
44 chr9:97910000-97910800 Enhancers ES-I3 Cell Line embryonic stem cell
45 chr9:97910000-97910800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr9:97910000-97911000 Enhancers Cortex derived primary cultured neurospheres brain
47 chr9:97910000-97911400 Enhancers Brain Angular Gyrus brain
48 chr9:97910200-97910400 Enhancers Skeletal Muscle Female skeletal muscle
49 chr9:97910200-97910400 Enhancers Small Intestine intestine
50 chr9:97910200-97910600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015