The 2.0 version of rSNPBase

Variant report

Variant rs4647449
Chromosome Location chr9:97994412-97994413
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:97973600-98024000 Weak transcription Gastric stomach
2 chr9:97974000-98009400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr9:97978000-98008400 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr9:97981400-98012400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr9:97981600-98009000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr9:97983400-98012400 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr9:97984600-97999600 Weak transcription Fetal Heart heart
8 chr9:97987200-98015400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr9:97987800-97999600 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr9:97987800-98008400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr9:97988200-98007200 Weak transcription Fetal Lung lung
12 chr9:97988400-98012200 Weak transcription Fetal Kidney kidney
13 chr9:97988600-97999600 Weak transcription Aorta Aorta
14 chr9:97989200-98009600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr9:97989200-98012400 Weak transcription Ovary ovary
16 chr9:97989400-97995200 Weak transcription HSMM muscle
17 chr9:97989400-98012400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr9:97989400-98013400 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr9:97989600-98006400 Weak transcription Fetal Muscle Trunk muscle
20 chr9:97989600-98012200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr9:97989800-98007400 Weak transcription Duodenum Mucosa Duodenum
22 chr9:97989800-98011200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr9:97990200-98013400 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr9:97990400-98008200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr9:97990400-98012600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr9:97990800-98001200 Weak transcription Pancreas Pancrea
27 chr9:97991000-98010400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chr9:97991200-98024000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr9:97992200-98003800 Weak transcription NHLF lung
30 chr9:97992200-98004600 Weak transcription HepG2 liver
31 chr9:97992400-98008800 Weak transcription Right Ventricle heart
32 chr9:97992600-98002200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr9:97992600-98013400 Weak transcription Liver Liver
34 chr9:97993000-98008400 Weak transcription Adipose Nuclei Adipose
35 chr9:97993200-98008400 Weak transcription Spleen Spleen
36 chr9:97993600-97994600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr9:97993600-97994600 Strong transcription Fetal Intestine Large intestine
38 chr9:97993800-97994600 Strong transcription Esophagus oesophagus
39 chr9:97993800-98000400 Weak transcription Fetal Intestine Small intestine
40 chr9:97993800-98008800 Weak transcription Lung lung
41 chr9:97994000-98006200 Weak transcription Fetal Muscle Leg muscle
42 chr9:97994200-97994600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
43 chr9:97994200-98001200 Weak transcription Fetal Stomach stomach
44 chr9:97994200-98011400 Weak transcription Hela-S3 cervix
45 chr9:97994400-97994600 Enhancers Skeletal Muscle Female skeletal muscle
46 chr9:97994400-97994800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr9:97994400-97997800 Strong transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015