Variant report

Variant rs12692978
Chromosome Location chr2:172725981-172725982
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:172690200-172750200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:172691400-172738600 Weak transcription Esophagus oesophagus
3 chr2:172692200-172733400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr2:172693200-172728000 Weak transcription Colonic Mucosa Colon
5 chr2:172693400-172734800 Weak transcription Brain Hippocampus Middle brain
6 chr2:172693600-172734400 Weak transcription Rectal Smooth Muscle rectum
7 chr2:172693600-172734600 Weak transcription HSMM muscle
8 chr2:172693800-172727000 Weak transcription Fetal Kidney kidney
9 chr2:172693800-172732600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr2:172693800-172734600 Weak transcription Right Ventricle heart
11 chr2:172694000-172732800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr2:172694000-172734600 Weak transcription Brain Cingulate Gyrus brain
13 chr2:172694000-172734600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr2:172698600-172734600 Weak transcription Adipose Nuclei Adipose
15 chr2:172699000-172734600 Weak transcription Brain Angular Gyrus brain
16 chr2:172699600-172731400 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr2:172704800-172731000 Weak transcription Brain Inferior Temporal Lobe brain
18 chr2:172705200-172731400 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr2:172705400-172735200 Weak transcription Stomach Smooth Muscle stomach
20 chr2:172709400-172734400 Weak transcription Colon Smooth Muscle Colon
21 chr2:172709600-172749600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr2:172709600-172749600 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr2:172709800-172731400 Weak transcription Fetal Muscle Leg muscle
24 chr2:172710800-172747800 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr2:172711400-172731000 Weak transcription GM12878-XiMat blood
26 chr2:172711600-172740000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr2:172712000-172727400 Weak transcription Primary B cells from peripheral blood blood
28 chr2:172712000-172731200 Weak transcription Primary B cells from cord blood blood
29 chr2:172712200-172731000 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr2:172712200-172749200 Weak transcription Hela-S3 cervix
31 chr2:172712400-172731400 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr2:172712400-172738200 Weak transcription Primary hematopoietic stem cells blood
33 chr2:172715400-172731200 Weak transcription Fetal Lung lung
34 chr2:172715400-172732600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr2:172715400-172735200 Weak transcription NHLF lung
36 chr2:172715600-172731200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr2:172716600-172736600 Weak transcription Ovary ovary
38 chr2:172719600-172731200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr2:172720800-172729600 Weak transcription Gastric stomach
40 chr2:172721200-172729400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr2:172721200-172731200 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr2:172721200-172734600 Weak transcription Right Atrium heart
43 chr2:172721200-172734600 Weak transcription HSMMtube muscle
44 chr2:172721200-172749600 Weak transcription Thymus Thymus
45 chr2:172721400-172731200 Weak transcription Primary T cells from cord blood blood
46 chr2:172721400-172731200 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr2:172721400-172731400 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr2:172721400-172731600 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr2:172721400-172732400 Weak transcription HMEC breast
50 chr2:172721400-172732600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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