Variant report

Variant rs908670
Chromosome Location chr2:172690180-172690181
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:172681000-172695000 Weak transcription Pancreas Pancrea
2 chr2:172681800-172693800 Strong transcription Fetal Adrenal Gland Adrenal Gland
3 chr2:172682000-172694000 Strong transcription Primary T cells fromperipheralblood blood
4 chr2:172683400-172693800 Strong transcription Stomach Smooth Muscle stomach
5 chr2:172683400-172694400 Strong transcription Primary T cells from cord blood blood
6 chr2:172683600-172693800 Strong transcription Left Ventricle heart
7 chr2:172683800-172694200 Strong transcription Breast Myoepithelial Primary Cells Breast
8 chr2:172684400-172694000 Strong transcription Primary T helper cells PMA-I stimulated --
9 chr2:172684600-172691600 Strong transcription Ovary ovary
10 chr2:172685000-172691200 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
11 chr2:172685200-172691600 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
12 chr2:172685400-172691600 ZNF genes & repeats H1 Cell Line embryonic stem cell
13 chr2:172685600-172693000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr2:172685600-172694600 Strong transcription Primary T helper naive cells fromperipheralblood blood
15 chr2:172685600-172694800 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr2:172685800-172690400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr2:172685800-172691400 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
18 chr2:172685800-172694000 Strong transcription Primary T regulatory cells fromperipheralblood blood
19 chr2:172686000-172694000 Strong transcription Primary T helper cells fromperipheralblood blood
20 chr2:172686200-172690200 Strong transcription Right Ventricle heart
21 chr2:172686200-172691800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
22 chr2:172686200-172698800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
23 chr2:172686800-172693600 Strong transcription Colon Smooth Muscle Colon
24 chr2:172687000-172694600 Strong transcription Rectal Mucosa Donor 29 rectum
25 chr2:172687200-172690200 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
26 chr2:172687200-172690600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr2:172687200-172690600 Weak transcription Liver Liver
28 chr2:172687200-172692200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr2:172687200-172693600 Strong transcription Rectal Smooth Muscle rectum
30 chr2:172687200-172694000 Strong transcription Duodenum Smooth Muscle Duodenum
31 chr2:172687400-172690200 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
32 chr2:172687400-172690200 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr2:172687400-172690200 ZNF genes & repeats Primary B cells from cord blood blood
34 chr2:172687400-172690200 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr2:172687400-172690200 ZNF genes & repeats Fetal Intestine Small intestine
36 chr2:172687400-172690400 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
37 chr2:172687400-172690400 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
38 chr2:172687400-172691200 ZNF genes & repeats iPS-15b Cell Line embryonic stem cell
39 chr2:172687400-172691200 ZNF genes & repeats Dnd41 blood
40 chr2:172687400-172691400 ZNF genes & repeats H9 Cell Line embryonic stem cell
41 chr2:172687400-172691600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
42 chr2:172687400-172691600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
43 chr2:172687400-172691800 Strong transcription Primary T killer naive cells fromperipheralblood blood
44 chr2:172687400-172693200 Strong transcription Colonic Mucosa Colon
45 chr2:172687400-172693400 Strong transcription HSMMtube muscle
46 chr2:172687400-172693800 Strong transcription Brain Anterior Caudate brain
47 chr2:172687400-172693800 Strong transcription Brain Inferior Temporal Lobe brain
48 chr2:172687400-172693800 Strong transcription Rectal Mucosa Donor 31 rectum
49 chr2:172687400-172694000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr2:172687400-172694000 Strong transcription Brain Cingulate Gyrus brain

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