The 2.0 version of rSNPBase

Variant report

Variant rs36057702
Chromosome Location chr2:172630778-172630779
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:172587800-172640800 Weak transcription Psoas Muscle Psoas
2 chr2:172593200-172645000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr2:172603000-172688400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr2:172604400-172641200 Weak transcription Colon Smooth Muscle Colon
5 chr2:172610200-172651400 Weak transcription Placenta Amnion Placenta Amnion
6 chr2:172618000-172639600 Weak transcription Fetal Heart heart
7 chr2:172618400-172639800 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr2:172618400-172641000 Weak transcription Aorta Aorta
9 chr2:172618800-172640800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr2:172619000-172638800 Weak transcription Primary T cells from cord blood blood
11 chr2:172619000-172641000 Weak transcription Spleen Spleen
12 chr2:172619200-172632400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr2:172619200-172634600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr2:172619200-172635000 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr2:172619200-172635200 Weak transcription A549 lung
16 chr2:172619200-172638600 Weak transcription Stomach Smooth Muscle stomach
17 chr2:172619200-172640800 Weak transcription Rectal Smooth Muscle rectum
18 chr2:172619200-172641000 Weak transcription Thymus Thymus
19 chr2:172619200-172641600 Weak transcription Gastric stomach
20 chr2:172619200-172641800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr2:172619600-172640200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr2:172620000-172634200 Weak transcription Brain Cingulate Gyrus brain
23 chr2:172620200-172630800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr2:172620200-172634600 Weak transcription Brain Angular Gyrus brain
25 chr2:172620200-172641400 Weak transcription NHEK skin
26 chr2:172620400-172638600 Weak transcription Primary B cells from cord blood blood
27 chr2:172620400-172638600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr2:172620400-172638600 Weak transcription HSMM muscle
29 chr2:172620400-172641000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr2:172620400-172641600 Weak transcription HUVEC blood vessel
31 chr2:172620400-172641800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr2:172620600-172640000 Weak transcription Muscle Satellite Cultured Cells --
33 chr2:172620800-172634600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr2:172620800-172634600 Weak transcription Brain Hippocampus Middle brain
35 chr2:172620800-172634800 Weak transcription NHDF-Ad bronchial
36 chr2:172620800-172639600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr2:172620800-172640600 Weak transcription Left Ventricle heart
38 chr2:172620800-172640800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr2:172621000-172634400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr2:172621000-172640000 Weak transcription Osteobl bone
41 chr2:172621000-172648000 Weak transcription HSMMtube muscle
42 chr2:172624400-172634600 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr2:172624600-172634800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr2:172624600-172640200 Weak transcription Right Ventricle heart
45 chr2:172624600-172640200 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr2:172625000-172634200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr2:172628800-172640400 Weak transcription Brain Anterior Caudate brain
48 chr2:172629800-172632600 Weak transcription HepG2 liver
49 chr2:172630600-172631000 ZNF genes & repeats Lung lung

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Last update: Aug 31, 2015