The 2.0 version of rSNPBase

Variant report

Variant rs13419987
Chromosome Location chr2:172623914-172623915
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:172587800-172640800 Weak transcription Psoas Muscle Psoas
2 chr2:172593200-172645000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr2:172602000-172624200 Weak transcription Esophagus oesophagus
4 chr2:172603000-172688400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr2:172604400-172641200 Weak transcription Colon Smooth Muscle Colon
6 chr2:172607400-172627000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr2:172609600-172628800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr2:172610200-172651400 Weak transcription Placenta Amnion Placenta Amnion
9 chr2:172618000-172626400 Weak transcription Primary hematopoietic stem cells blood
10 chr2:172618000-172639600 Weak transcription Fetal Heart heart
11 chr2:172618400-172639800 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr2:172618400-172641000 Weak transcription Aorta Aorta
13 chr2:172618800-172625800 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr2:172618800-172640800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr2:172619000-172624400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr2:172619000-172627800 Weak transcription Dnd41 blood
17 chr2:172619000-172630600 Weak transcription Lung lung
18 chr2:172619000-172638800 Weak transcription Primary T cells from cord blood blood
19 chr2:172619000-172641000 Weak transcription Spleen Spleen
20 chr2:172619200-172624000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr2:172619200-172624000 Weak transcription Brain Germinal Matrix brain
22 chr2:172619200-172624200 Weak transcription Right Ventricle heart
23 chr2:172619200-172627000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr2:172619200-172632400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr2:172619200-172634600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr2:172619200-172635000 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr2:172619200-172635200 Weak transcription A549 lung
28 chr2:172619200-172638600 Weak transcription Stomach Smooth Muscle stomach
29 chr2:172619200-172640800 Weak transcription Rectal Smooth Muscle rectum
30 chr2:172619200-172641000 Weak transcription Thymus Thymus
31 chr2:172619200-172641600 Weak transcription Gastric stomach
32 chr2:172619200-172641800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr2:172619400-172626000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr2:172619400-172627000 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr2:172619400-172627000 Weak transcription Fetal Muscle Leg muscle
36 chr2:172619600-172640200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr2:172619800-172626600 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr2:172620000-172634200 Weak transcription Brain Cingulate Gyrus brain
39 chr2:172620200-172625800 Weak transcription Fetal Stomach stomach
40 chr2:172620200-172627200 Weak transcription Liver Liver
41 chr2:172620200-172627200 Weak transcription Fetal Intestine Small intestine
42 chr2:172620200-172630800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr2:172620200-172634600 Weak transcription Brain Angular Gyrus brain
44 chr2:172620200-172641400 Weak transcription NHEK skin
45 chr2:172620400-172624200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr2:172620400-172626800 Weak transcription NH-A brain
47 chr2:172620400-172627600 Weak transcription Brain Anterior Caudate brain
48 chr2:172620400-172638600 Weak transcription Primary B cells from cord blood blood
49 chr2:172620400-172638600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr2:172620400-172638600 Weak transcription HSMM muscle

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Last update: Aug 31, 2015