The 2.0 version of rSNPBase

Variant report

Variant rs7355594
Chromosome Location chr2:172639448-172639449
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:172587800-172640800 Weak transcription Psoas Muscle Psoas
2 chr2:172593200-172645000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr2:172603000-172688400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr2:172604400-172641200 Weak transcription Colon Smooth Muscle Colon
5 chr2:172610200-172651400 Weak transcription Placenta Amnion Placenta Amnion
6 chr2:172618000-172639600 Weak transcription Fetal Heart heart
7 chr2:172618400-172639800 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr2:172618400-172641000 Weak transcription Aorta Aorta
9 chr2:172618800-172640800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr2:172619000-172641000 Weak transcription Spleen Spleen
11 chr2:172619200-172640800 Weak transcription Rectal Smooth Muscle rectum
12 chr2:172619200-172641000 Weak transcription Thymus Thymus
13 chr2:172619200-172641600 Weak transcription Gastric stomach
14 chr2:172619200-172641800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr2:172619600-172640200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr2:172620200-172641400 Weak transcription NHEK skin
17 chr2:172620400-172641000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr2:172620400-172641600 Weak transcription HUVEC blood vessel
19 chr2:172620400-172641800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr2:172620600-172640000 Weak transcription Muscle Satellite Cultured Cells --
21 chr2:172620800-172639600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr2:172620800-172640600 Weak transcription Left Ventricle heart
23 chr2:172620800-172640800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr2:172621000-172640000 Weak transcription Osteobl bone
25 chr2:172621000-172648000 Weak transcription HSMMtube muscle
26 chr2:172624600-172640200 Weak transcription Right Ventricle heart
27 chr2:172624600-172640200 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr2:172628800-172640400 Weak transcription Brain Anterior Caudate brain
29 chr2:172631400-172640000 Weak transcription Brain Germinal Matrix brain
30 chr2:172633400-172646200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr2:172633800-172641600 Weak transcription H9 Cell Line embryonic stem cell
32 chr2:172635000-172640200 Weak transcription GM12878-XiMat blood
33 chr2:172635400-172640000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr2:172635400-172640000 Weak transcription Fetal Muscle Leg muscle
35 chr2:172635400-172640200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr2:172635400-172640200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr2:172635400-172640400 Weak transcription Brain Cingulate Gyrus brain
38 chr2:172635400-172640800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr2:172635400-172640800 Weak transcription Brain Angular Gyrus brain
40 chr2:172635400-172647600 Weak transcription NHDF-Ad bronchial
41 chr2:172635400-172654800 Weak transcription A549 lung
42 chr2:172635600-172640200 Weak transcription Primary T helper cells PMA-I stimulated --
43 chr2:172635600-172640400 Weak transcription HUES6 Cell Line embryonic stem cell
44 chr2:172635600-172641600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr2:172635600-172643000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr2:172635600-172654600 Weak transcription Liver Liver
47 chr2:172636000-172640200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr2:172636400-172639800 Weak transcription Primary T regulatory cells fromperipheralblood blood
49 chr2:172636400-172641600 Weak transcription Fetal Intestine Large intestine
50 chr2:172636800-172654800 Weak transcription Small Intestine intestine

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Last update: Aug 31, 2015