The 2.0 version of rSNPBase

Variant report

Variant rs13017585
Chromosome Location chr2:172721808-172721809
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:172690200-172750200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:172691400-172738600 Weak transcription Esophagus oesophagus
3 chr2:172692200-172733400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr2:172693200-172728000 Weak transcription Colonic Mucosa Colon
5 chr2:172693400-172734800 Weak transcription Brain Hippocampus Middle brain
6 chr2:172693600-172724200 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr2:172693600-172734400 Weak transcription Rectal Smooth Muscle rectum
8 chr2:172693600-172734600 Weak transcription HSMM muscle
9 chr2:172693800-172725800 Weak transcription Duodenum Mucosa Duodenum
10 chr2:172693800-172727000 Weak transcription Fetal Kidney kidney
11 chr2:172693800-172732600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr2:172693800-172734600 Weak transcription Right Ventricle heart
13 chr2:172694000-172724200 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr2:172694000-172724200 Weak transcription Brain Germinal Matrix brain
15 chr2:172694000-172732800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr2:172694000-172734600 Weak transcription Brain Cingulate Gyrus brain
17 chr2:172694000-172734600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr2:172698600-172724200 Weak transcription Fetal Muscle Trunk muscle
19 chr2:172698600-172734600 Weak transcription Adipose Nuclei Adipose
20 chr2:172699000-172734600 Weak transcription Brain Angular Gyrus brain
21 chr2:172699600-172731400 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr2:172700200-172724200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr2:172700200-172724400 Weak transcription Fetal Stomach stomach
24 chr2:172700400-172724200 Weak transcription Fetal Brain Female brain
25 chr2:172704200-172724200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr2:172704800-172731000 Weak transcription Brain Inferior Temporal Lobe brain
27 chr2:172705200-172731400 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr2:172705400-172735200 Weak transcription Stomach Smooth Muscle stomach
29 chr2:172709400-172734400 Weak transcription Colon Smooth Muscle Colon
30 chr2:172709600-172749600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr2:172709600-172749600 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr2:172709800-172731400 Weak transcription Fetal Muscle Leg muscle
33 chr2:172710000-172724200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr2:172710400-172723800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr2:172710600-172724200 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr2:172710800-172747800 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr2:172711200-172724200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr2:172711400-172724200 Weak transcription Primary T cells fromperipheralblood blood
39 chr2:172711400-172731000 Weak transcription GM12878-XiMat blood
40 chr2:172711600-172724200 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr2:172711600-172740000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
42 chr2:172712000-172727400 Weak transcription Primary B cells from peripheral blood blood
43 chr2:172712000-172731200 Weak transcription Primary B cells from cord blood blood
44 chr2:172712200-172731000 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr2:172712200-172749200 Weak transcription Hela-S3 cervix
46 chr2:172712400-172724200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr2:172712400-172724200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr2:172712400-172731400 Weak transcription Primary T regulatory cells fromperipheralblood blood
49 chr2:172712400-172738200 Weak transcription Primary hematopoietic stem cells blood
50 chr2:172712600-172723800 Weak transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015