Variant report

Variant rs4668412
Chromosome Location chr2:172619770-172619771
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:172587800-172640800 Weak transcription Psoas Muscle Psoas
2 chr2:172588400-172619800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr2:172593200-172645000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr2:172602000-172624200 Weak transcription Esophagus oesophagus
5 chr2:172602600-172621800 Weak transcription H9 Cell Line embryonic stem cell
6 chr2:172603000-172688400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr2:172603400-172621200 Weak transcription Small Intestine intestine
8 chr2:172604400-172641200 Weak transcription Colon Smooth Muscle Colon
9 chr2:172605600-172622400 Weak transcription Primary T cells fromperipheralblood blood
10 chr2:172605800-172620600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr2:172606200-172620000 Weak transcription iPS-20b Cell Line embryonic stem cell
12 chr2:172607400-172627000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr2:172609000-172622200 Weak transcription Fetal Brain Male brain
14 chr2:172609200-172620400 Weak transcription Primary B cells from peripheral blood blood
15 chr2:172609600-172628800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr2:172609800-172620600 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr2:172610200-172651400 Weak transcription Placenta Amnion Placenta Amnion
18 chr2:172610400-172620000 Weak transcription iPS-18 Cell Line embryonic stem cell
19 chr2:172615400-172623800 Weak transcription Fetal Lung lung
20 chr2:172616400-172620400 Strong transcription Fetal Muscle Trunk muscle
21 chr2:172616600-172619800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr2:172616800-172619800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr2:172616800-172619800 Strong transcription Monocytes-CD14+_RO01746 blood
24 chr2:172616800-172620800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr2:172617000-172619800 Strong transcription Cortex derived primary cultured neurospheres brain
26 chr2:172617000-172620200 Strong transcription Fetal Stomach stomach
27 chr2:172617200-172620200 Strong transcription Liver Liver
28 chr2:172617200-172620800 Strong transcription Left Ventricle heart
29 chr2:172617600-172619800 Weak transcription Primary B cells from cord blood blood
30 chr2:172618000-172619800 Weak transcription H1 Cell Line embryonic stem cell
31 chr2:172618000-172620200 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr2:172618000-172620200 Strong transcription Fetal Intestine Small intestine
33 chr2:172618000-172626400 Weak transcription Primary hematopoietic stem cells blood
34 chr2:172618000-172639600 Weak transcription Fetal Heart heart
35 chr2:172618200-172621000 Weak transcription Ovary ovary
36 chr2:172618400-172619800 Weak transcription Brain Inferior Temporal Lobe brain
37 chr2:172618400-172620000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr2:172618400-172621000 Strong transcription GM12878-XiMat blood
39 chr2:172618400-172639800 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr2:172618400-172641000 Weak transcription Aorta Aorta
41 chr2:172618600-172620000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr2:172618600-172620400 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr2:172618600-172620800 Strong transcription ES-I3 Cell Line embryonic stem cell
44 chr2:172618600-172620800 Weak transcription Pancreas Pancrea
45 chr2:172618600-172620800 Enhancers HepG2 liver
46 chr2:172618600-172622200 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr2:172618800-172620400 Weak transcription Duodenum Mucosa Duodenum
48 chr2:172618800-172620600 Weak transcription HUES48 Cell Line embryonic stem cell
49 chr2:172618800-172620600 Genic enhancers HSMMtube muscle
50 chr2:172618800-172620800 Genic enhancers NHDF-Ad bronchial

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