Variant report

Variant rs12692973
Chromosome Location chr2:172642057-172642058
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:172593200-172645000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr2:172603000-172688400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr2:172610200-172651400 Weak transcription Placenta Amnion Placenta Amnion
4 chr2:172621000-172648000 Weak transcription HSMMtube muscle
5 chr2:172633400-172646200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr2:172635400-172647600 Weak transcription NHDF-Ad bronchial
7 chr2:172635400-172654800 Weak transcription A549 lung
8 chr2:172635600-172643000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr2:172635600-172654600 Weak transcription Liver Liver
10 chr2:172636800-172654800 Weak transcription Small Intestine intestine
11 chr2:172638000-172650200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
12 chr2:172638200-172645000 Strong transcription Breast Myoepithelial Primary Cells Breast
13 chr2:172638600-172642200 Strong transcription HSMM muscle
14 chr2:172638600-172644600 Strong transcription Skeletal Muscle Female skeletal muscle
15 chr2:172638600-172645600 Strong transcription Primary B cells from cord blood blood
16 chr2:172638600-172648400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr2:172638600-172650600 Strong transcription Stomach Smooth Muscle stomach
18 chr2:172638800-172642400 Strong transcription Primary hematopoietic stem cells blood
19 chr2:172638800-172642400 Strong transcription Brain Hippocampus Middle brain
20 chr2:172638800-172642600 Strong transcription Cortex derived primary cultured neurospheres brain
21 chr2:172638800-172644800 Strong transcription Primary T cells fromperipheralblood blood
22 chr2:172638800-172645400 Strong transcription Adipose Nuclei Adipose
23 chr2:172638800-172648400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr2:172638800-172650400 Strong transcription Monocytes-CD14+_RO01746 blood
25 chr2:172638800-172650800 Strong transcription Primary T cells from cord blood blood
26 chr2:172638800-172650800 Strong transcription Duodenum Smooth Muscle Duodenum
27 chr2:172638800-172651000 Strong transcription Dnd41 blood
28 chr2:172639000-172644400 Strong transcription Fetal Brain Female brain
29 chr2:172639200-172648400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr2:172639200-172650200 Strong transcription Primary monocytes fromperipheralblood blood
31 chr2:172639200-172650800 Strong transcription Primary T helper cells fromperipheralblood blood
32 chr2:172639400-172643800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr2:172639600-172642200 Strong transcription Fetal Heart heart
34 chr2:172639600-172645600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr2:172639600-172648400 Strong transcription Primary hematopoietic stem cells short term culture blood
36 chr2:172639800-172650200 Strong transcription Rectal Mucosa Donor 29 rectum
37 chr2:172639800-172650600 Strong transcription Primary T regulatory cells fromperipheralblood blood
38 chr2:172640000-172644400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr2:172640000-172644400 Strong transcription Brain Substantia Nigra brain
40 chr2:172640000-172644400 Strong transcription Esophagus oesophagus
41 chr2:172640000-172644400 Strong transcription Osteobl bone
42 chr2:172640000-172644600 Strong transcription Muscle Satellite Cultured Cells --
43 chr2:172640000-172645000 Strong transcription Fetal Muscle Leg muscle
44 chr2:172640000-172645200 Strong transcription Ovary ovary
45 chr2:172640000-172645400 Strong transcription Brain Germinal Matrix brain
46 chr2:172640000-172646600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr2:172640000-172648400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr2:172640000-172648400 Strong transcription Brain Inferior Temporal Lobe brain
49 chr2:172640000-172650400 Strong transcription Fetal Muscle Trunk muscle
50 chr2:172640000-172650400 Strong transcription Fetal Thymus thymus

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