Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1019906	0.92[CEU][hapmap];0.80[GIH][hapmap];0.86[JPT][hapmap];0.96[MEX][hapmap];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs10245285	0.95[CHB][hapmap];0.87[GIH][hapmap];0.86[TSI][hapmap]
rs10755842	1.00[CEU][hapmap];0.90[CHB][hapmap];0.95[JPT][hapmap];0.89[LWK][hapmap];0.96[MEX][hapmap]
rs10950520	1.00[CHB][hapmap];0.80[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11977804	0.91[CEU][hapmap]
rs11983089	0.84[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12155191	0.80[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12333379	0.82[ASN][1000 genomes]
rs12699611	0.88[CEU][hapmap];1.00[CHB][hapmap];0.86[GIH][hapmap];0.86[JPT][hapmap];0.86[MEX][hapmap];0.82[TSI][hapmap];0.93[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12699613	0.87[CEU][hapmap];0.95[CHB][hapmap]
rs1319592	0.88[CEU][hapmap]
rs1319593	0.92[CEU][hapmap];0.83[MEX][hapmap]
rs1469618	0.92[CEU][hapmap];0.83[MEX][hapmap]
rs17168097	0.88[CEU][hapmap]
rs17168106	0.92[CEU][hapmap]
rs17168109	0.89[CEU][hapmap]
rs2116532	1.00[CEU][hapmap];0.90[CHB][hapmap];0.95[JPT][hapmap];0.87[MEX][hapmap]
rs4721331	0.80[CHB][hapmap];0.80[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs6946703	0.84[CHB][hapmap];0.80[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs6947526	0.80[CHB][hapmap];0.83[MEX][hapmap];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6958890	0.96[CEU][hapmap];0.91[JPT][hapmap];0.83[MEX][hapmap]
rs6963946	0.92[CEU][hapmap];0.80[CHB][hapmap];0.83[MEX][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv606281	chr7:14388381-14443963	Weak transcription Flanking Active TSS Enhancers Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14414200-14416000	Enhancers	iPS-20b Cell Line	embryonic stem cell
2	chr7:14414200-14416800	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr7:14414400-14416000	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr7:14415200-14415800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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