Variant report

Variant	rs12746729
Chromosome Location	chr1:84271248-84271249
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs1010436	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10437027	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10489500	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10489505	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11802417	0.93[ASN][1000 genomes]
rs12728131	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12728368	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12735437	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12736562	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12742875	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12744687	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12744886	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12748928	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12754424	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1324487	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1569748	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17520771	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17521573	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs17521594	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs17521713	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs17522440	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17578175	0.96[AMR][1000 genomes]
rs17580638	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17580799	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs17581022	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2143756	0.84[AMR][1000 genomes]
rs2143757	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2147391	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34561331	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs35260485	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs35531285	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs35729141	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs35906154	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs36120300	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs3946083	0.84[AMR][1000 genomes]
rs6663404	0.84[AMR][1000 genomes]
rs71652653	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs71652654	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:84268800-84273400	Weak transcription	Adipose Nuclei	Adipose
2	chr1:84268800-84273600	Weak transcription	Liver	Liver
3	chr1:84271000-84271600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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