Variant report

Variant	rs1277764
Chromosome Location	chr10:18496403-18496404
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs1125417	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1277725	0.92[EUR][1000 genomes]
rs1277726	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1277727	0.96[EUR][1000 genomes]
rs1277728	1.00[EUR][1000 genomes]
rs1277757	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1277758	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1277759	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1277760	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1277761	0.80[EUR][1000 genomes]
rs1277766	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1277769	0.95[EUR][1000 genomes]
rs1300003	0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1539679	0.91[EUR][1000 genomes]
rs1573221	0.91[EUR][1000 genomes]
rs1573222	0.91[EUR][1000 genomes]
rs1757217	0.85[EUR][1000 genomes]
rs2482099	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18485000-18503800	Weak transcription	Duodenum Smooth Muscle	Duodenum
2	chr10:18486800-18502000	Weak transcription	Fetal Stomach	stomach
3	chr10:18493200-18497800	Weak transcription	Fetal Heart	heart
4	chr10:18493800-18497600	Weak transcription	Colon Smooth Muscle	Colon
5	chr10:18493800-18503800	Weak transcription	Fetal Brain Male	brain
6	chr10:18494000-18497600	Weak transcription	Primary hematopoietic stem cells	blood
7	chr10:18494200-18497800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr10:18494200-18499600	Weak transcription	Pancreatic Islets	Pancreatic Islet
9	chr10:18494400-18503600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr10:18494800-18497800	Weak transcription	Rectal Smooth Muscle	rectum
11	chr10:18495000-18497000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr10:18495200-18501400	Weak transcription	Stomach Smooth Muscle	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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