Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:73325101..73327806-chr15:73347351..73348941,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs11632079	0.81[EUR][1000 genomes]
rs11632354	1.00[AFR][1000 genomes]
rs11632433	1.00[AFR][1000 genomes]
rs11856233	0.81[EUR][1000 genomes]
rs12908090	1.00[ASN][1000 genomes]
rs12908199	0.81[EUR][1000 genomes]
rs12909626	1.00[ASN][1000 genomes]
rs12912599	0.81[EUR][1000 genomes]
rs12913381	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12917161	0.94[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2415214	1.00[ASN][1000 genomes]
rs34326722	1.00[AFR][1000 genomes]
rs34355572	0.81[EUR][1000 genomes]
rs34427117	0.81[EUR][1000 genomes]
rs34649871	0.81[EUR][1000 genomes]
rs34691393	1.00[ASN][1000 genomes]
rs34770199	1.00[ASN][1000 genomes]
rs34846029	1.00[ASN][1000 genomes]
rs35206920	1.00[ASN][1000 genomes]
rs35660974	1.00[AFR][1000 genomes]
rs35686353	1.00[ASN][1000 genomes]
rs35988290	1.00[ASN][1000 genomes]
rs36019616	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs36048782	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4636887	1.00[ASN][1000 genomes]
rs68000913	0.81[EUR][1000 genomes]
rs7176144	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7179577	1.00[ASN][1000 genomes]
rs72739406	1.00[ASN][1000 genomes]
rs7495433	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3352103	chr15:73191535-73454001	Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv482421	chr15:73279141-73426897	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
3	nsv904338	chr15:73313691-73483718	Enhancers Active TSS Strong transcription ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:73318600-73327600	Enhancers	Fetal Intestine Small	intestine
2	chr15:73318800-73328000	Enhancers	Fetal Intestine Large	intestine
3	chr15:73325400-73328600	Enhancers	Fetal Brain Female	brain
4	chr15:73325600-73329400	Enhancers	Fetal Brain Male	brain
5	chr15:73326000-73327200	Enhancers	Brain Germinal Matrix	brain
6	chr15:73326200-73327000	Enhancers	Fetal Lung	lung
7	chr15:73326400-73327800	Enhancers	Pancreatic Islets	Pancreatic Islet
8	chr15:73326400-73330800	Weak transcription	Pancreas	Pancrea
9	chr15:73326600-73327000	Enhancers	iPS-15b Cell Line	embryonic stem cell
10	chr15:73326600-73328000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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