Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:73262584..73265850-chr15:73343191..73346081,4	MCF-7	breast:

Variant related genes	Relation type
ENSG00000067141	Chromatin interaction

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs12903656	1.00[ASN][1000 genomes]
rs12908090	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12909626	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12913381	1.00[ASN][1000 genomes]
rs12913589	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12917161	1.00[ASN][1000 genomes]
rs16957506	0.82[AMR][1000 genomes]
rs16957509	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2415214	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34691393	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34770199	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34846029	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35206920	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35686353	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35988290	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36019616	1.00[ASN][1000 genomes]
rs36048782	1.00[ASN][1000 genomes]
rs7176144	1.00[ASN][1000 genomes]
rs7179577	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72739406	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3352103	chr15:73191535-73454001	Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:73264000-73267600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
2	chr15:73264200-73268600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr15:73264800-73268000	Weak transcription	Aorta	Aorta
4	chr15:73264800-73269400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr15:73265000-73268400	Weak transcription	Skeletal Muscle Male	skeletal muscle
6	chr15:73265200-73268200	Weak transcription	Fetal Brain Female	brain
7	chr15:73265400-73265800	Weak transcription	Fetal Brain Male	brain

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